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J7LZT1

- J7LZT1_9MICC

UniProt

J7LZT1 - J7LZT1_9MICC

Protein
Submitted name:

DNA ligase Lig

Gene

lig

Organism
Arthrobacter sp. Rue61a
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (31 Oct 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase LigImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligImported
    ORF Names:ARUE_c40090Imported
    OrganismiArthrobacter sp. Rue61aImported
    Taxonomic identifieri1118963 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter
    ProteomesiUP000003736: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    J7LZT1-1 [UniParc]FASTAAdd to Basket

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    MDLPVMPPVS PMLAKSVPTI PDVGHYEPKW DGFRTIVFKD GDEIVLGSRN    50
    EKPMTRYFPE VVEALRKNLP DKCVIDGEIV LIEGKRLEFE VLQQRIHPAD 100
    SRVRMLAEKT PASMIAFDIL ALGDENLMDK PFSERRAILE RTLAKADPPV 150
    YVTPAVTDLE RAQEWFVQLE GAGLDGVLSK PLDGAYQPNK RVMFKTKHER 200
    TADCVVAGFR WHKTAKVVGS MLLGLHDDTG RLHHVGVVAS FPMARREALV 250
    AELEPYQVEL SEHPWGEWAN QDETAGGSRM PGAQSRWSGG KDFSFVPLRP 300
    ELVIEVKYDY MEGDRFRHTT QFRRWRPDRT PESCTYSQLE EPADYDLGEI 350
    LRLP 354
    Length:354
    Mass (Da):40,210
    Last modified:October 31, 2012 - v1
    Checksum:i132ABF825F5D0EA2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003203 Genomic DNA. Translation: AFR30881.1.
    RefSeqiWP_014923090.1. NC_018531.1.
    YP_006663919.1. NC_018531.1.

    Genome annotation databases

    EnsemblBacteriaiAFR30881; AFR30881; ARUE_c40090.
    GeneIDi13562485.
    KEGGiarr:ARUE_c40090.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003203 Genomic DNA. Translation: AFR30881.1 .
    RefSeqi WP_014923090.1. NC_018531.1.
    YP_006663919.1. NC_018531.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFR30881 ; AFR30881 ; ARUE_c40090 .
    GeneIDi 13562485.
    KEGGi arr:ARUE_c40090.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a."
      Niewerth H., Schuldes J., Parschat K., Kiefer P., Vorholt J.A., Daniel R., Fetzner S.
      BMC Genomics 13:534-534(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Rue61aImported.

    Entry informationi

    Entry nameiJ7LZT1_9MICC
    AccessioniPrimary (citable) accession number: J7LZT1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 31, 2012
    Last sequence update: October 31, 2012
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3