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J7LZT1

- J7LZT1_9MICC

UniProt

J7LZT1 - J7LZT1_9MICC

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Protein
Submitted name:

DNA ligase Lig

Gene

lig

Organism
Arthrobacter sp. Rue61a
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase LigImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligImported
ORF Names:ARUE_c40090Imported
OrganismiArthrobacter sp. Rue61aImported
Taxonomic identifieri1118963 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter
ProteomesiUP000003736: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J7LZT1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDLPVMPPVS PMLAKSVPTI PDVGHYEPKW DGFRTIVFKD GDEIVLGSRN
60 70 80 90 100
EKPMTRYFPE VVEALRKNLP DKCVIDGEIV LIEGKRLEFE VLQQRIHPAD
110 120 130 140 150
SRVRMLAEKT PASMIAFDIL ALGDENLMDK PFSERRAILE RTLAKADPPV
160 170 180 190 200
YVTPAVTDLE RAQEWFVQLE GAGLDGVLSK PLDGAYQPNK RVMFKTKHER
210 220 230 240 250
TADCVVAGFR WHKTAKVVGS MLLGLHDDTG RLHHVGVVAS FPMARREALV
260 270 280 290 300
AELEPYQVEL SEHPWGEWAN QDETAGGSRM PGAQSRWSGG KDFSFVPLRP
310 320 330 340 350
ELVIEVKYDY MEGDRFRHTT QFRRWRPDRT PESCTYSQLE EPADYDLGEI

LRLP
Length:354
Mass (Da):40,210
Last modified:October 31, 2012 - v1
Checksum:i132ABF825F5D0EA2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003203 Genomic DNA. Translation: AFR30881.1.
RefSeqiWP_014923090.1. NC_018531.1.
YP_006663919.1. NC_018531.1.

Genome annotation databases

EnsemblBacteriaiAFR30881; AFR30881; ARUE_c40090.
GeneIDi13562485.
KEGGiarr:ARUE_c40090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003203 Genomic DNA. Translation: AFR30881.1 .
RefSeqi WP_014923090.1. NC_018531.1.
YP_006663919.1. NC_018531.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFR30881 ; AFR30881 ; ARUE_c40090 .
GeneIDi 13562485.
KEGGi arr:ARUE_c40090.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a."
    Niewerth H., Schuldes J., Parschat K., Kiefer P., Vorholt J.A., Daniel R., Fetzner S.
    BMC Genomics 13:534-534(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Rue61aImported.

Entry informationi

Entry nameiJ7LZT1_9MICC
AccessioniPrimary (citable) accession number: J7LZT1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: October 1, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3