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Protein
Submitted name:

DNA ligase Lig

Gene

lig

Organism
Arthrobacter sp. Rue61a
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase LigImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligImported
ORF Names:ARUE_c40090Imported
OrganismiArthrobacter sp. Rue61aImported
Taxonomic identifieri1118963 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeArthrobacter
ProteomesiUP000003736 Componenti: Chromosome

Family & Domainsi

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J7LZT1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLPVMPPVS PMLAKSVPTI PDVGHYEPKW DGFRTIVFKD GDEIVLGSRN
60 70 80 90 100
EKPMTRYFPE VVEALRKNLP DKCVIDGEIV LIEGKRLEFE VLQQRIHPAD
110 120 130 140 150
SRVRMLAEKT PASMIAFDIL ALGDENLMDK PFSERRAILE RTLAKADPPV
160 170 180 190 200
YVTPAVTDLE RAQEWFVQLE GAGLDGVLSK PLDGAYQPNK RVMFKTKHER
210 220 230 240 250
TADCVVAGFR WHKTAKVVGS MLLGLHDDTG RLHHVGVVAS FPMARREALV
260 270 280 290 300
AELEPYQVEL SEHPWGEWAN QDETAGGSRM PGAQSRWSGG KDFSFVPLRP
310 320 330 340 350
ELVIEVKYDY MEGDRFRHTT QFRRWRPDRT PESCTYSQLE EPADYDLGEI

LRLP
Length:354
Mass (Da):40,210
Last modified:October 31, 2012 - v1
Checksum:i132ABF825F5D0EA2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003203 Genomic DNA. Translation: AFR30881.1.
RefSeqiWP_014923090.1. NC_018531.1.

Genome annotation databases

EnsemblBacteriaiAFR30881; AFR30881; ARUE_c40090.
KEGGiarr:ARUE_c40090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003203 Genomic DNA. Translation: AFR30881.1.
RefSeqiWP_014923090.1. NC_018531.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFR30881; AFR30881; ARUE_c40090.
KEGGiarr:ARUE_c40090.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a."
    Niewerth H., Schuldes J., Parschat K., Kiefer P., Vorholt J.A., Daniel R., Fetzner S.
    BMC Genomics 13:534-534(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Rue61aImported.

Entry informationi

Entry nameiJ7LZT1_9MICC
AccessioniPrimary (citable) accession number: J7LZT1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: July 22, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.