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Protein
Submitted name:

Sialidase NedA

Gene

nedA1

Organism
Arthrobacter sp. Rue61a
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-(2->3)-sialidase activity Source: UniProtKB-EC
  2. exo-alpha-(2->6)-sialidase activity Source: UniProtKB-EC
  3. exo-alpha-(2->8)-sialidase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
Sialidase NedAImported (EC:3.2.1.18Imported)
Gene namesi
Name:nedA1Imported
ORF Names:ARUE_c06020Imported
OrganismiArthrobacter sp. Rue61aImported
Taxonomic identifieri1118963 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter
ProteomesiUP000003736 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. extrachromosomal circular DNA Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
2.60.40.10. 1 hit.
InterProiIPR018905. A-galactase_NEW3.
IPR001434. DUF11.
IPR013783. Ig-like_fold.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.
TIGRFAMsiTIGR01451. B_ant_repeat. 1 hit.

Sequencei

Sequence statusi: Complete.

J7LQ58-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARNTSSLHV VSHPPARSSF ERTSDLRSSS SPLARIAAVG TVSLGLLAGL
60 70 80 90 100
GLPATAAPIP PSNPAAAPGT FTEANIGADR TAANFFYRIP ALTYLGNNVV
110 120 130 140 150
LAAWDGRPGS AADAPNPNSI VQRRSTDGGQ TWGPVTVIAA GHVGDASGPK
160 170 180 190 200
YGYSDPSYIY DAEAGKVLAF FVYSKDQGFG GSQFGNNDAD RTVISSAVIE
210 220 230 240 250
SSDGGVTWSQ PRLITNVTKP GTSKTSPVAG DVRSNFASSG EGIQLKYGQY
260 270 280 290 300
KGRLIQQFAG DIRQADGTNK IQAYSVYSDD HGATWHKGDN VGDRMDENKT
310 320 330 340 350
VELSDGRVLL NSRDNANQGY RKVAISTDGG ATYGPVTQDT ELPDPANNGA
360 370 380 390 400
IARMFPNAAQ GSADAKKLIF TNASSKTGRE NVSARVSCDD GATWPGVRTI
410 420 430 440 450
RSGFSAYSTV TRLENDKFGV LYEGNYTDNM PFAKFDDAWL NYVCAPLAVP
460 470 480 490 500
AVTTAPGATQ QVPVTVTNQE AATLSGASAT VYTPSGWSAT TVPVPDVAPG
510 520 530 540 550
ASVTVNVALT APANASGPQN LNAAFTTANG RVSQFTFTAT VPAAPQVGLT
560 570 580 590 600
ITGTAPARDV VASPYQMGDV LSYSLNVKST ANVTANSVPV SGTFDSGFLP
610 620 630 640 650
PSAPNCRFNN LAAGASYTCT TAKHVITAAD IQRGYFVPEA SFSITASSTP
660 670 680 690 700
SLTKTVPFTG AAVALRDGLL TADISGARAD VGRDLATQPY AAGDQVPYAF
710 720 730 740 750
TVKNTSPLVE KVVPTAGNFS PFLPEGPGNC RYSVLPAGQS YQCATPRHTV
760 770 780 790 800
TAEEAEQGFF IPKTTWEASS AGQSTKTITV DGGEVDLKVR EPKLEGTVSA
810 820 830 840 850
EWSDADGDRF ASVGDPVTYT YTVGNAGNVA VTGLEAPDAG ISAATLPAGD
860 870 880 890 900
TVTATRERVL TAADVAAGSL GAVSFEATAW NGSRAVAAAA GSDPLALAVQ
910 920 930 940 950
PARPDSVPTL TVQELGTPPT DLGTADKYRT GQKVVLKGLE YGNWYYVYLN
960 970 980 990 1000
KTGYRLGWIF PTTDNAVEFI LPSDVKNGRD DAVVLDKDGG QVSFDRLQVT

PKG
Length:1,003
Mass (Da):104,251
Last modified:October 30, 2012 - v1
Checksum:iD70124617D948B79
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003203 Genomic DNA. Translation: AFR27537.1.
RefSeqiWP_014920687.1. NC_018531.1.
YP_006660575.1. NC_018531.1.

Genome annotation databases

EnsemblBacteriaiAFR27537; AFR27537; ARUE_c06020.
GeneIDi13562809.
KEGGiarr:ARUE_c06020.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003203 Genomic DNA. Translation: AFR27537.1.
RefSeqiWP_014920687.1. NC_018531.1.
YP_006660575.1. NC_018531.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFR27537; AFR27537; ARUE_c06020.
GeneIDi13562809.
KEGGiarr:ARUE_c06020.

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
2.60.40.10. 1 hit.
InterProiIPR018905. A-galactase_NEW3.
IPR001434. DUF11.
IPR013783. Ig-like_fold.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.
TIGRFAMsiTIGR01451. B_ant_repeat. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a."
    Niewerth H., Schuldes J., Parschat K., Kiefer P., Vorholt J.A., Daniel R., Fetzner S.
    BMC Genomics 13:534-534(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Rue61aImported.

Entry informationi

Entry nameiJ7LQ58_9MICC
AccessioniPrimary (citable) accession number: J7LQ58
Entry historyi
Integrated into UniProtKB/TrEMBL: October 30, 2012
Last sequence update: October 30, 2012
Last modified: January 6, 2015
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.