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J7L5Q4 (J7L5Q4_NOCAA) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length601 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
J7L5Q4 [UniParc].

Last modified October 31, 2012. Version 1.
Checksum: 9B5330069A177776

FASTA60163,876
        10         20         30         40         50         60 
MRTPRLGALA AAVLLGTGLL TAPATAAADA APPSPTPAAA QEAGDTIVHL FQWNWDSVAA 

        70         80         90        100        110        120 
ECVDFLGPRG YGGVQVSPPQ EHVVVPTAEG GNHPWWQDYQ PVSYRIDNTR RGTAEEFRNM 

       130        140        150        160        170        180 
VETCADQGVR IYVDAVINHM TGPRENEGPG SAGTDWELYE YPDLFGDGEA SYTYEDFGPC 

       190        200        210        220        230        240 
YETIENWQDK EEVQNCQLLG LADLNTGDPE VRAQIVRYLN GLVALGVGGF RVDASKHVPE 

       250        260        270        280        290        300 
DDMGAIIGAL DEVPGFGGAP RVYHEVYGDQ TIPYTAYTPY GQVTNFDHQR NLASSFADGN 

       310        320        330        340        350        360 
IADLTSMPDF GGLTGDESVV FVDNHDTQRY EPTLTYLDGD RYHLATAFML AHPYGTPVVM 

       370        380        390        400        410        420 
SSYDFRGNVS EGPPSVGEVD GNPAGWITAD SDCSGSDWVC EHRNETVAGM VSFRNAVEGT 

       430        440        450        460        470        480 
DLTERLRDGS ARVAFDRGET GFAAFNASGQ AWSLSAPTSL PDGAYDNAAG PGTATVADGR 

       490        500        510        520        530        540 
VTAAVPAEGA LALHVGGECE EGCDGGGEGP GEPGTLTATV ETRPGQEVHV VGSTPELGSW 

       550        560        570        580        590        600 
EPANGVRLST DADTYPEWRG NVDIAPDAEW KLVRVDTDGT ADWEPGDNRV GPAAAVTWGR 


G 

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References

[1]"Whole-genome sequence of Nocardiopsis alba strain ATCC BAA-2165 associated with honeybees."
Qiao J., Chen L., Li Y., Wang J., Zhang W., Chen S.
Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-2165 / BE74.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003788 Genomic DNA. Translation: AFR08026.1.
RefSeqYP_006639297.1. NC_018524.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFR08026; AFR08026; B005_0150.
GeneID13544468.
KEGGnal:B005_0150.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ7L5Q4_NOCAA
AccessionPrimary (citable) accession number: J7L5Q4
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: October 16, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)