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Protein

Superoxide dismutase

Gene

sodA

Organism
Nocardiopsis alba (strain ATCC BAA-2165 / BE74)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:B005_3508Imported
OrganismiNocardiopsis alba (strain ATCC BAA-2165 / BE74)Imported
Taxonomic identifieri1205910 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptosporangialesNocardiopsaceaeNocardiopsis
ProteomesiUP000003779 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliJ7L473.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.
OMAiVNWDDVE.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J7L473-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAPYSLPEL PYDYAALEPW ISGQIMELHH DKHHATYVAG ANSTLEQMAE
60 70 80 90 100
AREAGDFGTV NQLQKNLAFH LGGHVNHSVF WKNLSPEGGD KPEGELGAAI
110 120 130 140 150
DDQFGSFDAF RAHFNAAATG IQGSGWAILA WDALGQRLII EQLYDQQANI
160 170 180 190 200
AIGTQPLLML DMWEHAFYLQ YKNVKGEYVK AFWNVVNWAD VQERFAEARK

TKLG
Length:204
Mass (Da):22,794
Last modified:October 31, 2012 - v1
Checksum:iBCDC6B82AA6C643C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003788 Genomic DNA. Translation: AFR08473.1.
RefSeqiWP_014910931.1. NC_018524.1.
YP_006642575.1. NC_018524.1.

Genome annotation databases

EnsemblBacteriaiAFR08473; AFR08473; B005_3508.
KEGGinal:B005_3508.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003788 Genomic DNA. Translation: AFR08473.1.
RefSeqiWP_014910931.1. NC_018524.1.
YP_006642575.1. NC_018524.1.

3D structure databases

ProteinModelPortaliJ7L473.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFR08473; AFR08473; B005_3508.
KEGGinal:B005_3508.

Phylogenomic databases

KOiK04564.
OMAiVNWDDVE.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Whole-genome sequence of Nocardiopsis alba strain ATCC BAA-2165 associated with honeybees."
    Qiao J., Chen L., Li Y., Wang J., Zhang W., Chen S.
    Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-2165 / BE74Imported.

Entry informationi

Entry nameiJ7L473_NOCAA
AccessioniPrimary (citable) accession number: J7L473
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: June 24, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.