J7KYZ1 (J7KYZ1_PECCC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL AFR03714.1

Gene names

ORF Names:

PCC21_023110 EMBL AFR03714.1

Organism

Pectobacterium carotovorum subsp. carotovorum PCC21 EMBL AFR03714.1

Taxonomic identifier

1218933 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium › Erwinia carotovora › Pectobacterium carotovorum subsp. carotovorum

Protein attributes

Sequence length	421 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL AFR03714.1 Transferase
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	J7KYZ1 [UniParc]. Last modified October 31, 2012. Version 1. Checksum: 012AB03C57BB7C28	FASTA	421	45,151
	10 20 30 40 50 60 MKNSELNQRR LAATPRGVGV MCDFYAERAE NSTLWDVEGR EFIDFAAGIA VLNTGHRHPK 70 80 90 100 110 120 IVAAVREQLD RFTHTAYQIV PYGSYVTLAE RINALAPIEG AAKTTFFTTG AEAVENAVKI 130 140 150 160 170 180 ARAYTKRPGV IAFNAAFHGR TLLTMTLTGK VAPYSTGFGP FPGSIFHALY PNEKQGISVE 190 200 210 220 230 240 QALESVERLM HTDIAADQVA AIILEPVQGE GGFHVAPPAF ISGLRKLCDE HGILLIADEV 250 260 270 280 290 300 QTGFARTGKL FAMEYYAEKA DLITMAKSLG GGFPISGVVG RADVMDAPSP GGLGGTYAGN 310 320 330 340 350 360 PLSVASALAV LDVIEEEKLC QRAQRLGAAL VETLEKIKAQ CPALVAIRAQ GSMVAAEFND 370 380 390 400 410 420 PQTGKPSAEI TRQFQKSALE AGLLLLTCGV HGNVIRFLYP LTVPDDQFSK AMSILTRVLT R

References

[1]	"Genome Sequence of Pectobacterium carotovorum subsp. carotovorum Strain PCC21, a Pathogen Causing Soft Rot in Chinese Cabbage." Park T.H., Choi B.S., Choi A.Y., Choi I.Y., Heu S., Park B.S. J. Bacteriol. 194:6345-6346(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: PCC21 EMBL AFR03714.1.
[2]	"Cassytha pubescens and C. glabella (Lauraceae) are not disjunctly distributed between Australia and the Ryukyu Archipelago of Japan - evidence from morphological and molecular data." Kokubugata G., Nakamura K., Forster P.I., Wilson G.W., Holland A.E., Hirayama Y., Yokota M. Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: PCC21 EMBL AFR03714.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003776 Genomic DNA. Translation: AFR03714.1.
RefSeq	YP_006646967.1. NC_018525.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFR03714; AFR03714; PCC21_023110.
GeneID	13534894.
KEGG	pcc:PCC21_023110.
Phylogenomic databases
KO	K00823.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

J7KYZ1_PECCC

Accession

Primary (citable) accession number: J7KYZ1

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2012
Last sequence update:	October 31, 2012
Last modified:	April 3, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)