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Protein

Anaerobic glycerol-3-phosphate dehydrogenase subunit B

Gene

glpB

Organism
Pectobacterium carotovorum subsp. carotovorum PCC21
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.UniRule annotation

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotationSAAS annotation

Cofactori

FMNUniRule annotationSAAS annotation

Pathwayi

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationSAAS annotation

Keywords - Ligandi

Flavoprotein, FMNUniRule annotationSAAS annotation

Enzyme and pathway databases

UniPathwayiUPA00618; UER00673.

Names & Taxonomyi

Protein namesi
Recommended name:
Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotation (EC:1.1.5.3UniRule annotation)
Short name:
Anaerobic G-3-P dehydrogenase subunit BUniRule annotation
Short name:
Anaerobic G3Pdhase BUniRule annotation
Gene namesi
Name:glpBUniRule annotation
ORF Names:PCC21_039400Imported
OrganismiPectobacterium carotovorum subsp. carotovorum PCC21Imported
Taxonomic identifieri1218933 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
ProteomesiUP000003783 Componenti: Chromosome

Interactioni

Subunit structurei

Composed of a catalytic GlpA/B dimer and of membrane bound GlpC.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the anaerobic G-3-P dehydrogenase subunit B family.UniRule annotation

Phylogenomic databases

KOiK00112.

Family and domain databases

HAMAPiMF_00753. Glycerol3P_GlpB.
InterProiIPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

Sequencei

Sequence statusi: Complete.

J7KVC5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRYDVVIIGG GLAGLTCGIR LAEQGKRCAI VSAGQNALHF SSGALDLLSH
60 70 80 90 100
LPDGQPVSQP LDALDELAHQ APHHPYSRMG AAAVAALLPQ AEALLERSNI
110 120 130 140 150
TLQGNHQQNH WRMTPLGKFR ACWLSPVDGV TRGLPDSRFG DNPLIAGIEG
160 170 180 190 200
FLDFQSRIVA GTLQTQGIAA RSDELKLPVL DRLRQNPSEF RAVNIARVLD
210 220 230 240 250
RPENRSALLE ELSLLANGND AIIMPACLGL DSPEIINELA DALGKPVLLL
260 270 280 290 300
PTLPPSLLGL RLHQALSQRF RQLGGMVMPG DRAVRASLSP QEIAIHSHHH
310 320 330 340 350
RDIPLRAKHA VLASGSFFSN GLVTQFDRVT EPVFGLDVRF ADQREGWSQQ
360 370 380 390 400
DVFAPQPYLQ FGAIVDEYLH PCIGGETVNN LYAIGAVLEG FDPIVQGCGA
410 420
GVSLLSALHV AEQILKEGNP
Length:420
Mass (Da):45,284
Last modified:October 31, 2012 - v1
Checksum:i6CA27299674C0D2D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003776 Genomic DNA. Translation: AFR05343.1.
RefSeqiWP_014916911.1. NC_018525.1.
YP_006648596.1. NC_018525.1.

Genome annotation databases

EnsemblBacteriaiAFR05343; AFR05343; PCC21_039400.
KEGGipcc:PCC21_039400.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003776 Genomic DNA. Translation: AFR05343.1.
RefSeqiWP_014916911.1. NC_018525.1.
YP_006648596.1. NC_018525.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFR05343; AFR05343; PCC21_039400.
KEGGipcc:PCC21_039400.

Phylogenomic databases

KOiK00112.

Enzyme and pathway databases

UniPathwayiUPA00618; UER00673.

Family and domain databases

HAMAPiMF_00753. Glycerol3P_GlpB.
InterProiIPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome Sequence of Pectobacterium carotovorum subsp. carotovorum Strain PCC21, a Pathogen Causing Soft Rot in Chinese Cabbage."
    Park T.H., Choi B.S., Choi A.Y., Choi I.Y., Heu S., Park B.S.
    J. Bacteriol. 194:6345-6346(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC21Imported.

Entry informationi

Entry nameiJ7KVC5_PECCC
AccessioniPrimary (citable) accession number: J7KVC5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: April 29, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.