J7KVC5 (J7KVC5_PECCC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Anaerobic glycerol-3-phosphate dehydrogenase subunit B HAMAP-Rule MF_00753
Short name=Anaerobic G-3-P dehydrogenase subunit B HAMAP-Rule MF_00753
Short name=Anaerobic G3Pdhase B HAMAP-Rule MF_00753
EC=1.1.5.3 HAMAP-Rule MF_00753

Gene names

Name:	glpB HAMAP-Rule MF_00753
ORF Names:	PCC21_039400 EMBL AFR05343.1

Organism

Pectobacterium carotovorum subsp. carotovorum PCC21 EMBL AFR05343.1

Taxonomic identifier

1218933 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium › Erwinia carotovora › Pectobacterium carotovorum subsp. carotovorum

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor By similarity. HAMAP-Rule MF_00753
Catalytic activity	sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol. HAMAP-Rule MF_00753 SAAS SAAS003953
Cofactor	FMN By similarity. HAMAP-Rule MF_00753 SAAS SAAS003953
Pathway	Polyol metabolism; glycerol degradation via glycerol kinase pathway; glycerone phosphate from sn-glycerol 3-phosphate (anaerobic route): step 1/1. HAMAP-Rule MF_00753 SAAS SAAS003953
Subunit structure	Composed of a catalytic GlpA/B dimer and of membrane bound GlpC By similarity. HAMAP-Rule MF_00753
Sequence similarities	Belongs to the anaerobic G-3-P dehydrogenase subunit B family. HAMAP-Rule MF_00753

Ontologies

Keywords
Ligand	FMN HAMAP-Rule MF_00753 SAAS SAAS003953 Flavoprotein HAMAP-Rule MF_00753 SAAS SAAS003953
Molecular function	Oxidoreductase HAMAP-Rule MF_00753 SAAS SAAS009158
Gene Ontology (GO)
Biological_process	glycerol catabolic process Inferred from electronic annotation. Source: UniProtKB-UniPathway glycerol-3-phosphate metabolic process Inferred from electronic annotation. Source: HAMAP
Molecular_function	sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	J7KVC5 [UniParc]. Last modified October 31, 2012. Version 1. Checksum: 6CA27299674C0D2D	FASTA	420	45,284
	10 20 30 40 50 60 MRYDVVIIGG GLAGLTCGIR LAEQGKRCAI VSAGQNALHF SSGALDLLSH LPDGQPVSQP 70 80 90 100 110 120 LDALDELAHQ APHHPYSRMG AAAVAALLPQ AEALLERSNI TLQGNHQQNH WRMTPLGKFR 130 140 150 160 170 180 ACWLSPVDGV TRGLPDSRFG DNPLIAGIEG FLDFQSRIVA GTLQTQGIAA RSDELKLPVL 190 200 210 220 230 240 DRLRQNPSEF RAVNIARVLD RPENRSALLE ELSLLANGND AIIMPACLGL DSPEIINELA 250 260 270 280 290 300 DALGKPVLLL PTLPPSLLGL RLHQALSQRF RQLGGMVMPG DRAVRASLSP QEIAIHSHHH 310 320 330 340 350 360 RDIPLRAKHA VLASGSFFSN GLVTQFDRVT EPVFGLDVRF ADQREGWSQQ DVFAPQPYLQ 370 380 390 400 410 420 FGAIVDEYLH PCIGGETVNN LYAIGAVLEG FDPIVQGCGA GVSLLSALHV AEQILKEGNP

References

[1]	"Genome Sequence of Pectobacterium carotovorum subsp. carotovorum Strain PCC21, a Pathogen Causing Soft Rot in Chinese Cabbage." Park T.H., Choi B.S., Choi A.Y., Choi I.Y., Heu S., Park B.S. J. Bacteriol. 194:6345-6346(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: PCC21 EMBL AFR05343.1.
[2]	"Cassytha pubescens and C. glabella (Lauraceae) are not disjunctly distributed between Australia and the Ryukyu Archipelago of Japan - evidence from morphological and molecular data." Kokubugata G., Nakamura K., Forster P.I., Wilson G.W., Holland A.E., Hirayama Y., Yokota M. Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: PCC21 EMBL AFR05343.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003776 Genomic DNA. Translation: AFR05343.1.
RefSeq	YP_006648596.1. NC_018525.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFR05343; AFR05343; PCC21_039400.
GeneID	13536523.
KEGG	pcc:PCC21_039400.
Phylogenomic databases
KO	K00112.
Enzyme and pathway databases
UniPathway	UPA00618; UER00673.
Family and domain databases
HAMAP	MF_00753. Glycerol3P_GlpB.
InterPro	IPR003953. FAD_bind_dom. IPR009158. G3P_DH_GlpB_su. [Graphical view]
Pfam	PF00890. FAD_binding_2. 1 hit. [Graphical view]
PIRSF	PIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMs	TIGR03378. glycerol3P_GlpB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

J7KVC5_PECCC

Accession

Primary (citable) accession number: J7KVC5

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2012
Last sequence update:	October 31, 2012
Last modified:	April 3, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)