J7J9L0 (J7J9L0_BURCE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

ORF Names:

GEM_4542 EMBL AFQ50932.1

Organism

Burkholderia cepacia GG4 EMBL AFQ50932.1

Taxonomic identifier

1009846 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex › Burkholderia cepacia

Protein attributes

Sequence length	373 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL AFQ50932.1
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	J7J9L0 [UniParc]. Last modified October 31, 2012. Version 1. Checksum: CB1342090FFC6DBD	FASTA	373	40,354
	10 20 30 40 50 60 MPRPIVAHIR PDAVRHNLDF IRRTAAQSRV WAVIKANAYG HGVERIYPGL AAADGIALLD 70 80 90 100 110 120 LDEAVRVREL GWDKPVLLLE GIFEPADVEL ADRHRLTVAV HCDQQLDLLI AAKPQQPIDI 130 140 150 160 170 180 QLKMNSGMNR LGYRPDAFRA AWERAAAAPS IGKITLMMHF ANADEGEVDW QLEQFDATTA 190 200 210 220 230 240 GIPGERSASN SAAVLWHPRA HRDWVRPGTI LYGASPTGAA RHIADTPLMA AMTLTSKIIG 250 260 270 280 290 300 VQTLAPEETV GYGRRFTVDR PMRIGVVACG YADGYPRHAP TGTPIAVDGV MTRVVGRVSM 310 320 330 340 350 360 DMLTVDLTPC PNAGIGSSVE LWGDQVKVDD VAEASGTIGY ELMCALARRV PVVIEPPGAS 370 TLQPALRTGS YGR

References

[1]

"Complete Genome Sequence of Burkholderia sp. Strain GG4, a Betaproteobacterium That Reduces 3-Oxo-N-Acylhomoserine Lactones and Produces Different N-Acylhomoserine Lactones." Hong K.W., Koh C.L., Sam C.K., Yin W.F., Chan K.G. J. Bacteriol. 194:6317-6317(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: GG4 EMBL AFQ50932.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003775 Genomic DNA. Translation: AFQ50932.1.
RefSeq	YP_006618626.1. NC_018514.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFQ50932; AFQ50932; GEM_4542.
GeneID	13509567.
KEGG	bct:GEM_4542.
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

J7J9L0_BURCE

Accession

Primary (citable) accession number: J7J9L0

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2012
Last sequence update:	October 31, 2012
Last modified:	April 3, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)