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J7J9L0 (J7J9L0_BURCE) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length373 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2521Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1301Substrate By similarity HAMAP-Rule MF_01201
Binding site3001Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
J7J9L0 [UniParc].

Last modified October 31, 2012. Version 1.
Checksum: CB1342090FFC6DBD

FASTA37340,354
        10         20         30         40         50         60 
MPRPIVAHIR PDAVRHNLDF IRRTAAQSRV WAVIKANAYG HGVERIYPGL AAADGIALLD 

        70         80         90        100        110        120 
LDEAVRVREL GWDKPVLLLE GIFEPADVEL ADRHRLTVAV HCDQQLDLLI AAKPQQPIDI 

       130        140        150        160        170        180 
QLKMNSGMNR LGYRPDAFRA AWERAAAAPS IGKITLMMHF ANADEGEVDW QLEQFDATTA 

       190        200        210        220        230        240 
GIPGERSASN SAAVLWHPRA HRDWVRPGTI LYGASPTGAA RHIADTPLMA AMTLTSKIIG 

       250        260        270        280        290        300 
VQTLAPEETV GYGRRFTVDR PMRIGVVACG YADGYPRHAP TGTPIAVDGV MTRVVGRVSM 

       310        320        330        340        350        360 
DMLTVDLTPC PNAGIGSSVE LWGDQVKVDD VAEASGTIGY ELMCALARRV PVVIEPPGAS 

       370 
TLQPALRTGS YGR 

« Hide

References

[1]"Complete Genome Sequence of Burkholderia sp. Strain GG4, a Betaproteobacterium That Reduces 3-Oxo-N-Acylhomoserine Lactones and Produces Different N-Acylhomoserine Lactones."
Hong K.W., Koh C.L., Sam C.K., Yin W.F., Chan K.G.
J. Bacteriol. 194:6317-6317(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: GG4 EMBL AFQ50932.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003775 Genomic DNA. Translation: AFQ50932.1.
RefSeqYP_006618626.1. NC_018514.1.

3D structure databases

ProteinModelPortalJ7J9L0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFQ50932; AFQ50932; GEM_4542.
GeneID13509567.
KEGGbct:GEM_4542.

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ7J9L0_BURCE
AccessionPrimary (citable) accession number: J7J9L0
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: February 19, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)