J7IY40 (J7IY40_DESMD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Ordered Locus Names:

Desmer_2078 EMBL AFQ44018.1

Organism

Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) [Complete proteome] [HAMAP] EMBL AFQ44018.1

Taxonomic identifier

768704 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfosporosinus › Desulfosporosinus meridiei

Protein attributes

Sequence length	216 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	J7IY40 [UniParc]. Last modified October 31, 2012. Version 1. Checksum: FF06B0EA869A97D8	FASTA	216	24,984
	10 20 30 40 50 60 MQYLTVPLGQ HRLPPLPYSY HALEPVVSGK LLEIHHSQHH KAYVEGLNKA ELKMAEARGK 70 80 90 100 110 120 RDYSLVKHWE REIAFHGSGH ILHSIYWTSM APIGNRWETP GTQIHNLMAN YFGSFLAFQE 130 140 150 160 170 180 QFSEAAINVE GSGWAALVWQ PGWGRLEILA IEKHQNFFQV GGIPLLVMDV WEHAYYLDYL 190 200 210 SKRKEYVRSW WQIVNWAAVE KRLNLALVGQ MPLVIN

References

[1]

"Finished genome of Desulfosporosinus meridiei DSM 13257." Huntemann M., Wei C.-L., Han J., Detter J.C., Han C., Davenport K., Daligault H., Erkkila T., Gu W., Munk A.C.C., Teshima H., Xu Y., Chain P., Tapia R., Chen A., Krypides N., Mavromatis K., Markowitz V. , Szeto E., Ivanova N., Mikhailova N., Ovchinnikova G., Pagani I., Pati A., Goodwin L., Peters L., Pitluck S., Woyke T., Pester M., Spring S., Ollivier B., Rattei T., Klenk H.-P., Wagner M., Loy A. Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003629 Genomic DNA. Translation: AFQ44018.1.
RefSeq	YP_006621889.1. NC_018515.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFQ44018; AFQ44018; Desmer_2078.
GeneID	13514693.
KEGG	dmi:Desmer_2078.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K04564.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

J7IY40_DESMD

Accession

Primary (citable) accession number: J7IY40

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2012
Last sequence update:	October 31, 2012
Last modified:	April 3, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)