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Protein
Submitted name:

RNA polymerase beta subunit

Gene

rpoB

Organism
Paraburkholderia zhejiangensis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
RNA polymerase beta subunitImported
Gene namesi
Name:rpoBImported
OrganismiParaburkholderia zhejiangensisImported
Taxonomic identifieri871203 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCaballeronia

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 89RNA_pol_Rpb2_45InterPro annotationAdd BLAST66

Family and domain databases

Gene3Di2.30.150.10. 1 hit.
InterProiIPR019462. DNA-dir_RNA_pol_bsu_external_1.
IPR015712. DNA-dir_RNA_pol_su2.
[Graphical view]
PANTHERiPTHR20856. PTHR20856. 1 hit.
PfamiPF10385. RNA_pol_Rpb2_45. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

J7IEZ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
NIGLINSLAL YAHLNEYGFL ETPYRKVVDS KVTDQIDYLS AIEEGRYVIA
60 70 80 90 100
QANAAVSEDG TLTDELVSSR EAGETLMVTP DRIQYMDVAP SQIVSVAASL
110 120
IPFLEHDDAN RALMGTNMQR
Length:120
Mass (Da):13,208
Last modified:October 31, 2012 - v1
Checksum:iF2F67383CCD0E3E0
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei120Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JX186752 Genomic DNA. Translation: AFQ37917.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JX186752 Genomic DNA. Translation: AFQ37917.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.30.150.10. 1 hit.
InterProiIPR019462. DNA-dir_RNA_pol_bsu_external_1.
IPR015712. DNA-dir_RNA_pol_su2.
[Graphical view]
PANTHERiPTHR20856. PTHR20856. 1 hit.
PfamiPF10385. RNA_pol_Rpb2_45. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiJ7IEZ2_9BURK
AccessioniPrimary (citable) accession number: J7IEZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: June 8, 2016
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.