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Protein
Submitted name:

RNA polymerase beta subunit

Gene

rpoB

Organism
Burkholderia zhejiangensis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA-directed RNA polymerase activity Source: InterPro
  2. ribonucleoside binding Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
RNA polymerase beta subunitImported
Gene namesi
Name:rpoBImported
OrganismiBurkholderia zhejiangensisImported
Taxonomic identifieri871203 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Family & Domainsi

Family and domain databases

Gene3Di2.30.150.10. 1 hit.
InterProiIPR019462. DNA-dir_RNA_pol_bsu_external_1.
IPR015712. DNA-dir_RNA_pol_su2.
[Graphical view]
PANTHERiPTHR20856. PTHR20856. 1 hit.
PfamiPF10385. RNA_pol_Rpb2_45. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

J7IEZ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
NIGLINSLAL YAHLNEYGFL ETPYRKVVDS KVTDQIDYLS AIEEGRYVIA
60 70 80 90 100
QANAAVSEDG TLTDELVSSR EAGETLMVTP DRIQYMDVAP SQIVSVAASL
110 120
IPFLEHDDAN RALMGTNMQR
Length:120
Mass (Da):13,208
Last modified:October 31, 2012 - v1
Checksum:iF2F67383CCD0E3E0
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei120 – 1201Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JX186752 Genomic DNA. Translation: AFQ37917.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JX186752 Genomic DNA. Translation: AFQ37917.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.30.150.10. 1 hit.
InterProiIPR019462. DNA-dir_RNA_pol_bsu_external_1.
IPR015712. DNA-dir_RNA_pol_su2.
[Graphical view]
PANTHERiPTHR20856. PTHR20856. 1 hit.
PfamiPF10385. RNA_pol_Rpb2_45. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Burkholderia grimmiae sp. nov., isolated from a xerophilous moss (Grimmia montana)."
    Tian Y., Kong B.H., Liu S.L., Li C.L., Yu R., Liu L., Li Y.H.
    Int. J. Syst. Evol. Microbiol. 63:2108-2113(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: OP-1Imported.

Entry informationi

Entry nameiJ7IEZ2_9BURK
AccessioniPrimary (citable) accession number: J7IEZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: October 29, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.