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J7H6U9 (J7H6U9_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:HLA-DQB1 EMBL AFP95352.1
OrganismHomo sapiens (Human) EMBL AFP95352.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length183 AA.
Sequence statusFragment.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS014745

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AFP95352.1
Non-terminal residue1831 EMBL AFP95352.1

Sequences

Sequence LengthMass (Da)Tools
J7H6U9 [UniParc].

Last modified October 31, 2012. Version 1.
Checksum: 56D0DB492EA6B72E

FASTA18321,426
        10         20         30         40         50         60 
DFVYQFKGMC YFTNGTERVR LVSRSIYNRE EIVRFDSDVG EFRAVTLLGL PAAEYWNSQK 

        70         80         90        100        110        120 
DILERKRAAV DRVCRHNYQL ELRTTLQRRV EPTVTISPSR TEALNHHNLL VCSVTDFYPA 

       130        140        150        160        170        180 
QIKVRWFRND QEETAGVVST PLIRNGDWTF QILVMLEMTP QRGDVYTCHV EHPSLQSPIT 


VEW 

« Hide

References

[1]Heron S.D., Ferriola D., Lind C.T., Monos D.
Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Identification of a novel HLA-DQB1*02 variant allele, DQB1*02:01:06."
Heron S., Ferriola D., Lind C., Monos D.S.
Tissue Antigens 82:72-72(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
JX471069 Genomic DNA. Translation: AFP95352.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.10.320.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011162. MHC_I/II-like_Ag-recog.
IPR014745. MHC_II_a/b_N.
IPR000353. MHC_II_b_N.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00969. MHC_II_beta. 1 hit.
[Graphical view]
ProDomPD000328. MHC_II_b_N. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00407. IGc1. 1 hit.
SM00921. MHC_II_beta. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSHLA-DQB1. human.

Entry information

Entry nameJ7H6U9_HUMAN
AccessionPrimary (citable) accession number: J7H6U9
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.