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J3Y9U2 (J3Y9U2_MYCGL) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118 EMBL AFP75845.1
ORF Names:HFMG94VAA_1946 EMBL AFP75845.1
OrganismMycoplasma gallisepticum VA94_7994-1-7P [Complete proteome] EMBL AFP75845.1
Taxonomic identifier1159197 [NCBI]
Taxonomic lineageBacteriaTenericutesMollicutesMycoplasmataceaeMycoplasma

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
J3Y9U2 [UniParc].

Last modified October 31, 2012. Version 1.
Checksum: 4E5FF42AAFE23148

FASTA39443,127
        10         20         30         40         50         60 
MAKERFDRSK PHVNIGTIGH IDHGKTTLTA AICTVLSKAG TSEAKKYDEI DAAPEEKARG 

        70         80         90        100        110        120 
ITINTAHVEY ATQNRHYAHV DCPGHADYVK NMITGAAQMD GGILVVSATD GPMPQTREHI 

       130        140        150        160        170        180 
LLARQVGVPK MVVFLNKCDV ADDPEMQELV EMEVRDLLKS YGFDGDNTPV IRGSALGALN 

       190        200        210        220        230        240 
GEPVWEEKIH ELMKAVDEYI PTPDREVDKP FLLPIEDTMT ITGRGTVVTG RVERGQLKVG 

       250        260        270        280        290        300 
EEVEIVGITD TRKVVVTGIE MFRKELDAAM AGDNAGILLR GVDRKDVQRG QVLAKPGSIT 

       310        320        330        340        350        360 
PHKKFRAEIY ALKKDEGGRH TAFLNGYRPQ FYFRTTDVTG SIQLKEGTEM VMPGDNTEII 

       370        380        390 
VELISSIACE KGSKFSIREG GRTVGAGTVV EVLE 

« Hide

References

[1]"Extensive variation in surface lipoprotein gene content and genomic changes associated with virulence during evolution of a novel North American house finch epizootic strain of Mycoplasma gallisepticum."
Tulman E.R., Liao X., Szczepanek S.M., Ley D.H., Kutish G.F., Geary S.J.
Microbiology 158:2073-2088(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: VA94_7994-1-7P EMBL AFP75845.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003506 Genomic DNA. Translation: AFP75845.1.
RefSeqYP_006581126.1. NC_018406.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFP75845; AFP75845; HFMG94VAA_1946.
GeneID13460166.
KEGGmgv:HFMG94VAA_1946.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ3Y9U2_MYCGL
AccessionPrimary (citable) accession number: J3Y9U2
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: June 11, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)