Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

J3X9S4 (J3X9S4_LACHE) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:R0052_03050 EMBL AFR21569.1
OrganismLactobacillus helveticus R0052 [Complete proteome] EMBL AFR21569.1
Taxonomic identifier880633 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU004468
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
J3X9S4 [UniParc].

Last modified October 31, 2012. Version 1.
Checksum: 997FDB5DB78DFA67

FASTA47555,647
        10         20         30         40         50         60 
MTRTLDKNFL WGGAVAAHQL EGAYQEGGKG ISIADIMTLG DRDHPREITK TIEKDKYYPN 

        70         80         90        100        110        120 
HVGIDFYHHY KEDIKMMAEM GFKAFRTSIA WTRIFPNGDE DAPNEAGLKF YDDLFDELLK 

       130        140        150        160        170        180 
YDIQPVVTLS HFEMPYHLVT KYGGWSNRKL IDFFTRFAHV CFERYHNKVK YWMTFNEINN 

       190        200        210        220        230        240 
QANYEDIGNV LKNSGLLFKK GDDKEKMMYQ AAHYELVASA EAVQIGHAID PSLQIGCMLA 

       250        260        270        280        290        300 
FCPIYPASSK PEDILFAQRA MDTRLYFGDI HVNGEYPNWL KAYFDRKNYH LDITEKDLQI 

       310        320        330        340        350        360 
LKNGTVDYIA FSYYMSFTAK YTDHMDYREY QDLVENPYIK TNDWSWAIDP IGLRYAMNWM 

       370        380        390        400        410        420 
TTRWHKPLFI VENGLGAYDK MTDDHQIHDD YRIQYFRDHI KQMEKAVIDD GIDLIGYLPW 

       430        440        450        460        470 
GCIDLVSAST GEMKKRYGFI YVNEDDHGKG SFKRYPKDSF YWYKKVIASN GADLD 

« Hide

References

[1]"Complete Genome Sequence of Lactobacillus helveticus R0052, a Commercial Probiotic Strain."
Tompkins T.A., Barreau G., Broadbent J.R.
J. Bacteriol. 194:6349-6349(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: R0052 EMBL AFR21569.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003799 Genomic DNA. Translation: AFR21569.1.
RefSeqYP_006655373.1. NC_018528.1.

3D structure databases

ProteinModelPortalJ3X9S4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFR21569; AFR21569; R0052_03050.
GeneID13554406.
KEGGlhr:R0052_03050.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01223.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ3X9S4_LACHE
AccessionPrimary (citable) accession number: J3X9S4
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: February 19, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)