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J3UM40 (J3UM40_BACTU) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length391 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site411Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2691Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1391Substrate By similarity HAMAP-Rule MF_01201
Binding site3171Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue411N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
J3UM40 [UniParc].

Last modified October 31, 2012. Version 1.
Checksum: 8E0EC2DB726EF6AA

FASTA39143,539
        10         20         30         40         50         60 
MSLKYGRDTI VEIDLNAVKH NVNEFKKHVN DEKIKMMAAV KANGYGHGAV EVAKAAIEAG 

        70         80         90        100        110        120 
INQLAVAFVD EAIELREAGI TVPILILGYT PVAAVEDVIQ YDVMMTVYRV EDLHGINEIA 

       130        140        150        160        170        180 
NRLQKKVQIQ VKIDTGMSRI GLQEEEVKPF LEELNRMEYV EVVGIFTHYS TADEIDKSYT 

       190        200        210        220        230        240 
NMQTSLFEKA VNTARELGIQ IPYIHSSNSA GSIELSNTFQ NMVRVGIGVY GMYPSKEVDH 

       250        260        270        280        290        300 
TIVSLQPALS LKSKVAHIKH AKKNRGVSYG NTYVTTGEEW IATVPIGYAD GYNRQLSNKG 

       310        320        330        340        350        360 
YALINGIRVP VIGRVCMDQL MLDVSKAMPV QVGDEVVFYG KQGEENIAVE EIADMLGTIN 

       370        380        390 
YEVTCMLDRR IPRVYKENDE TTAVVNILRK N 

« Hide

References

[1]Doggett N., Teshima H., Bruce D., Detter J.C., Johnson S.L., Han C.
Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HD-771 EMBL AFQ15386.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003752 Genomic DNA. Translation: AFQ15386.1.
RefSeqYP_006603419.1. NC_018500.1.

3D structure databases

ProteinModelPortalJ3UM40.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFQ15386; AFQ15386; BTG_09600.
GeneID13498482.
KEGGbti:BTG_09600.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ3UM40_BACTU
AccessionPrimary (citable) accession number: J3UM40
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: July 9, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)