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J3QW86 (J3QW86_BACTU) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EMBL EEM25877.1
Gene names
Name:plcR EMBL AFV21202.1
ORF Names:BTB_c55520 EMBL AFV21202.1, bthur0002_52210 EMBL EEM25877.1
OrganismBacillus thuringiensis Bt407 [Complete proteome] EMBL EEM25877.1
Taxonomic identifier527021 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group

Protein attributes

Sequence length285 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 4FSC PDB 3U3W
Complete proteome
Gene Ontology (GO)
   Molecular_functionsequence-specific DNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
J3QW86 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: DAF07B062329A848

FASTA28533,944
        10         20         30         40         50         60 
MQAEKLGSEI KKIRVLRGLT QKQLSENICH QSEVSRIESG AVYPSMDILQ GIAAKLQIPI 

        70         80         90        100        110        120 
IHFYEVLIYS DIERKKQFKD QVIMLCKQKR YKEIYNKVWN ELKKEEYHPE FQQFLQWQYY 

       130        140        150        160        170        180 
VAAYVLKKVD YEYCILELKK LLNQQLTGID VYQNLYIENA IANIYAENGY LKKGIDLFEQ 

       190        200        210        220        230        240 
ILKQLEALHD NEEFDVKVRY NHAKALYLDS RYEESLYQVN KAIEISCRIN SMALIGQLYY 

       250        260        270        280 
QRGECLRKLE YEEAEIEDAY KKASFFFDIL EMHAYKEALV NKISR 

« Hide

References

[1]"Genomic characterization of the Bacillus cereus sensu lato species: Backdrop to the evolution of Bacillus anthracis."
Zwick M.E., Joseph S.J., Didelot X., Chen P.E., Bishop-Lilly K.A., Stewart A.C., Willner K., Nolan N., Lentz S., Thomason M.K., Sozhamannan S., Mateczun A.J., Du L., Read T.D.
Genome Res. 22:1512-1524(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Bt407 EMBL EEM25877.1.
[2]"Complete Genome Sequence of Bacillus thuringiensis Strain 407 Cry-."
Sheppard A.E., Poehlein A., Rosenstiel P., Liesegang H., Schulenburg H.
Genome Announc. 1:E00158-12(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Structural basis for the activation mechanism of the PlcR virulence regulator by the quorum-sensing signal peptide PapR."
Grenha R., Slamti L., Nicaise M., Refes Y., Lereclus D., Nessler S.
Proc. Natl. Acad. Sci. U.S.A. 110:1047-1052(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003889 Genomic DNA. Translation: AFV21202.1.
ACMZ01000112 Genomic DNA. Translation: EEM25877.1.
RefSeqYP_006930139.1. NC_018877.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3U3WX-ray2.40A/B1-285[»]
4FSCX-ray3.65A/B/C/D1-285[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFV21202; AFV21202; BTB_c55520.
EEM25877; EEM25877; bthur0002_52210.
GeneID13848235.
KEGGbtg:BTB_c55520.

Organism-specific databases

CMRSearch...

Family and domain databases

Gene3D1.10.260.40. 1 hit.
1.25.40.10. 1 hit.
InterProIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR011990. TPR-like_helical.
[Graphical view]
PfamPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMSSF47413. SSF47413. 1 hit.
PROSITEPS50943. HTH_CROC1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ3QW86_BACTU
AccessionPrimary (citable) accession number: J3QW86
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: January 22, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)