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Protein
Submitted name:

PlcR protein PlcR

Gene

plcR

Organism
Bacillus thuringiensis Bt407
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
PlcR protein PlcRImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:plcRImported
ORF Names:BTB_c55520Imported, bthur0002_52210Imported
OrganismiBacillus thuringiensis Bt407Imported
Taxonomic identifieri527021 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group
ProteomesiUP000001233: Chromosome, UP000010109: Chromosome

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3U3WX-ray2.40A/B1-285[»]
4FSCX-ray3.65A/B/C/D1-285[»]
ProteinModelPortaliJ3QW86.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
1.25.40.10. 1 hit.
InterProiIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PfamiPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J3QW86-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MQAEKLGSEI KKIRVLRGLT QKQLSENICH QSEVSRIESG AVYPSMDILQ
60 70 80 90 100
GIAAKLQIPI IHFYEVLIYS DIERKKQFKD QVIMLCKQKR YKEIYNKVWN
110 120 130 140 150
ELKKEEYHPE FQQFLQWQYY VAAYVLKKVD YEYCILELKK LLNQQLTGID
160 170 180 190 200
VYQNLYIENA IANIYAENGY LKKGIDLFEQ ILKQLEALHD NEEFDVKVRY
210 220 230 240 250
NHAKALYLDS RYEESLYQVN KAIEISCRIN SMALIGQLYY QRGECLRKLE
260 270 280
YEEAEIEDAY KKASFFFDIL EMHAYKEALV NKISR
Length:285
Mass (Da):33,944
Last modified:October 3, 2012 - v1
Checksum:iDAF07B062329A848
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003889 Genomic DNA. Translation: AFV21202.1.
ACMZ01000112 Genomic DNA. Translation: EEM25877.1.
RefSeqiYP_006930139.1. NC_018877.1.

Genome annotation databases

EnsemblBacteriaiAFV21202; AFV21202; BTB_c55520.
EEM25877; EEM25877; bthur0002_52210.
GeneIDi13848235.
KEGGibtg:BTB_c55520.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003889 Genomic DNA. Translation: AFV21202.1.
ACMZ01000112 Genomic DNA. Translation: EEM25877.1.
RefSeqiYP_006930139.1. NC_018877.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3U3WX-ray2.40A/B1-285[»]
4FSCX-ray3.65A/B/C/D1-285[»]
ProteinModelPortaliJ3QW86.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFV21202; AFV21202; BTB_c55520.
EEM25877; EEM25877; bthur0002_52210.
GeneIDi13848235.
KEGGibtg:BTB_c55520.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
1.25.40.10. 1 hit.
InterProiIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PfamiPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genomic characterization of the Bacillus cereus sensu lato species: Backdrop to the evolution of Bacillus anthracis."
    Zwick M.E., Joseph S.J., Didelot X., Chen P.E., Bishop-Lilly K.A., Stewart A.C., Willner K., Nolan N., Lentz S., Thomason M.K., Sozhamannan S., Mateczun A.J., Du L., Read T.D.
    Genome Res. 22:1512-1524(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Bt407Imported.
  2. "Complete Genome Sequence of Bacillus thuringiensis Strain 407 Cry-."
    Sheppard A.E., Poehlein A., Rosenstiel P., Liesegang H., Schulenburg H.
    Genome Announc. 1:E00158-12(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "Structural basis for the activation mechanism of the PlcR virulence regulator by the quorum-sensing signal peptide PapR."
    Grenha R., Slamti L., Nicaise M., Refes Y., Lereclus D., Nessler S.
    Proc. Natl. Acad. Sci. U.S.A. 110:1047-1052(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS).

Entry informationi

Entry nameiJ3QW86_BACTU
AccessioniPrimary (citable) accession number: J3QW86
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: February 4, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.