J3QM78 (J3QM78_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Limb region 1 protein Ensembl ENSMUSP00000136160

Gene names

Name:

Lmbr1 Ensembl ENSMUSP00000136160 MGI 1861746

Organism

Mus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000136160

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	462 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000136160

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	embryonic digit morphogenesis Inferred from mutant phenotype PubMed 11606546. Source: MGI
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	J3QM78 [UniParc]. Last modified October 3, 2012. Version 1. Checksum: 7C7BB73028642428	FASTA	462	51,839
	10 20 30 40 50 60 MEGQDEVSAR EQHFHSQVRE STICFLLFAI LYIVSYFIII RYKRKSDEQE DEDAVVNRIS 70 80 90 100 110 120 LFLSTFTLAV SAGAVLLLPF SIISNEILLA FPHNYYIQWL NGSLIHGYAG MKGGIRARIL 130 140 150 160 170 180 ETLVMLLLLA LLILGMVWVA SALIDSDAAS MESLYDLWEF YLPYLYSCIS LMGCLLLLLC 190 200 210 220 230 240 TPVGLSRMFT VMGQLLVKPA ILEDLDEQIY MITLEEEALQ RRLHGLSSSV EYNVMELEQE 250 260 270 280 290 300 LENVKILKTK LERRKKASAW ERNLVYPAVM VLLLIETSIS VLLVACNILC LLVDETAMPK 310 320 330 340 350 360 GTRGPGIGSA SLSTFGFVGA ALEIILIFYL MVSSVVGFYS LRFFGNFTPK KDDTTMTKII 370 380 390 400 410 420 GNCVSILVLS SALPVMSRTL GITRFDLLGD FGRFNWLGNF YIVLSYNLLF AIMTTLCLIR 430 440 450 460 KFTSAVREEL FKALGLHKLH LSDTSRDSET TKPSANGHQK AL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P. PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J Ensembl ENSMUSP00000136160.
[2]	Ensembl Submitted (AUG-2012) to UniProtKB Cited for: IDENTIFICATION. Strain: C57BL/6J Ensembl ENSMUSP00000136160.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC159298 Genomic DNA. No translation available. AC171500 Genomic DNA. No translation available. AC175116 Genomic DNA. No translation available.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSMUST00000179191; ENSMUSP00000136160; ENSMUSG00000010721.
Organism-specific databases
MGI	MGI:1861746. Lmbr1.
Phylogenomic databases
GeneTree	ENSGT00390000007809.
Family and domain databases
InterPro	IPR008075. Lipcalin_1_rcpt. IPR006876. LMBR1-like_membr_prot. [Graphical view]
Pfam	PF04791. LMBR1. 2 hits. [Graphical view]
PRINTS	PR01692. LIPOCALINIMR.
ProtoNet	Search...
Other
ChiTaRS	LMBR1. mouse.
NextBio	35562810.
SOURCE	Search...

Entry information

Entry name

J3QM78_MOUSE

Accession

Primary (citable) accession number: J3QM78

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2012
Last sequence update:	October 3, 2012
Last modified:	April 3, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)