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J3KMY9 (J3KMY9_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:CHRNA2 Ensembl ENSP00000240132
OrganismHomo sapiens (Human) [Reference proteome] Ensembl ENSP00000240132
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length514 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ligand-gated ion channel (TC 1.A.9) family. [View classification] RuleBase RU000687

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000240132

Sequences

Sequence LengthMass (Da)Tools
J3KMY9 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: 777F58CA00518BC8

FASTA51458,140
        10         20         30         40         50         60 
MGPSCPVFLS FTKLSLWWLL LTPAGGEEAK RPPPRAPGDP LSSPSPTALP QGGSHTETED 

        70         80         90        100        110        120 
RLFKHLFRGY NRWARPVPNT SDVDEKNQMM TTNVWLKQEW SDYKLRWNPT DFGNITSLRV 

       130        140        150        160        170        180 
PSEMIWIPDI VLYNNADGEF AVTHMTKAHL FSTGTVHWVP PAIYKSSCSI DVTFFPFDQQ 

       190        200        210        220        230        240 
NCKMKFGSWT YDKAKIDLEQ MEQTVDLKDY WESGEWAIVN ATGTYNSKKY DCCAEIYPDV 

       250        260        270        280        290        300 
TYAFVIRRLP LFYTINLIIP CLLISCLTVL VFYLPSDCGE KITLCISVLL SLTVFLLLIT 

       310        320        330        340        350        360 
EIIPSTSLVI PLIGEYLLFT MIFVTLSIVI TVFVLNVHHR SPSTHTMPHW VRGALLGCVP 

       370        380        390        400        410        420 
RWLLMNRPPP PVELCHPLRL KLSPSYHWLE SNVDAEEREV VVEEEDRWAC AGHVAPSVGT 

       430        440        450        460        470        480 
LCSHGHLHSG ASGPKAEALL QEGELLLSPH MQKALEGVHY IADHLRSEDA DSSVKEDWKY 

       490        500        510 
VAMVIDRIFL WLFIIVCFLG TIGLFLPPFL AGMI 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF311103 Genomic DNA. No translation available.
RefSeqNP_001269384.1. NM_001282455.1.
UniGeneHs.57718.

3D structure databases

ProteinModelPortalJ3KMY9.
SMRJ3KMY9. Positions 56-510.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000240132; ENSP00000240132; ENSG00000120903.
GeneID1135.
KEGGhsa:1135.
UCSCuc011lal.2. human.

Organism-specific databases

CTD1135.
HGNCHGNC:1956. CHRNA2.
GenAtlasSearch...

Phylogenomic databases

KOK04804.

Gene expression databases

ArrayExpressJ3KMY9.

Family and domain databases

Gene3D1.20.120.370. 2 hits.
2.70.170.10. 1 hit.
InterProIPR027361. Acetylcholine_rcpt_TM.
IPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
IPR018000. Neurotransmitter_ion_chnl_CS.
IPR002394. Nicotinic_acetylcholine_rcpt.
[Graphical view]
PANTHERPTHR18945. PTHR18945. 1 hit.
PfamPF02931. Neur_chan_LBD. 1 hit.
PF02932. Neur_chan_memb. 1 hit.
[Graphical view]
PRINTSPR00254. NICOTINICR.
PR00252. NRIONCHANNEL.
SUPFAMSSF63712. SSF63712. 1 hit.
SSF90112. SSF90112. 1 hit.
TIGRFAMsTIGR00860. LIC. 1 hit.
PROSITEPS00236. NEUROTR_ION_CHANNEL. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSCHRNA2. human.
GenomeRNAi1135.
NextBio35534772.

Entry information

Entry nameJ3KMY9_HUMAN
AccessionPrimary (citable) accession number: J3KMY9
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.