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J3KCI5 (J3KCI5_COCIM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length831 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
J3KCI5 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: 307EC902F796CF5D

FASTA83193,023
        10         20         30         40         50         60 
MSNPVRKRKR GDPGDPPRTF RSIDSFFKSP RKQPHEADCR IPKSPSEHQL LTDEELARKL 

        70         80         90        100        110        120 
QAEWDNDASS NFRNATPTNS DENQAPPSQD MKASDGQDPI PAPPKSCVFA SSKKKKSVLS 

       130        140        150        160        170        180 
LQTSTSAEDT ISMSLPLDQP PLTFSPSLYL DKLREFWNTE GGHASYSILA RAFSLVNSTQ 

       190        200        210        220        230        240 
SRIRIVDILV NLLRILIEGD PDSLLPAVWL ATNAFAPPYV PLELGLGGSA ISKALKKAYG 

       250        260        270        280        290        300 
LDNLGLKTLY DKYGDAGDVA YEAKKKQSFT LRRPKPLSIK GVYDSLMKIA NSKGTGSQEN 

       310        320        330        340        350        360 
KQRLVEQLLR DARGAEESRY IVRTLVQHLR IGAVRTTMLI ALARAFLYSR PPSASYRVHT 

       370        380        390        400        410        420 
NADLMKLKRD ELASLYAKAE EMIKASYARH PNYNDLIPCL LATGISEAVL AKCGLALHVP 

       430        440        450        460        470        480 
LLPMLGSITR DLTEMLTKLQ GRKFSCEYKY DGQRAQVHCD SSGKVSLFSR HLELMTDKYP 

       490        500        510        520        530        540 
DLVSLVPQIR GDGVSSFILE GEVVAVDQES GVLLPFQTLS NRAKKNVEIG DIKINVCLFA 

       550        560        570        580        590        600 
FDLMYLNGEA LLERPFRERR ELLRSLFVEI PNRFSWVKSI DATSSESETI LNFFQEATNA 

       610        620        630        640        650        660 
KCEGIMVKVL DDGTDGEASG ILTSEESSNI SGEKQKASRR RTLLSTYEPD KRLDSWLKVK 

       670        680        690        700        710        720 
KDYNAAFDTL DLIPIAGWHG QGRKAQWWSP ILLAVRNPET GSLEAVTKCM SGFTDKFYQE 

       730        740        750        760        770        780 
NKEKYAENGN NTIPRPSYVE YRNEPEVWFE PQEVWEIAFA DITLSPTYTA AIGMASEERG 

       790        800        810        820        830 
LSLRFPRFLR VREDKTIEEA STSSTLAELW KKQMARLQSE GADLPQEEEN G 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GG704916 Genomic DNA. Translation: EAS32950.2.
RefSeqXP_001244363.1. XM_001244362.1.
XP_001244533.1. XM_001244532.1.

3D structure databases

ProteinModelPortalJ3KCI5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4562844.
4563017.
KEGGcim:CIMG_03804.
cim:CIMG_03974.

Phylogenomic databases

KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ3KCI5_COCIM
AccessionPrimary (citable) accession number: J3KCI5
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: November 13, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)