I7LVK0 (I7LVK0_TETTS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pyridoxal-dependent decarboxylase conserved domain containing protein EMBL EAR98380.2

Gene names

ORF Names:

TTHERM_00289080 EMBL EAR98380.2

Organism

Tetrahymena thermophila (strain SB210) [Reference proteome] EMBL EAR98380.2

Taxonomic identifier

312017 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Alveolata › Ciliophora › Intramacronucleata › Oligohymenophorea › Hymenostomatida › Tetrahymenina › Tetrahymenidae › Tetrahymena › Tetrahymena thermophila

Protein attributes

Sequence length	501 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I7LVK0 [UniParc]. Last modified October 3, 2012. Version 1. Checksum: 8BD047199BED73EC	FASTA	501	57,959
	10 20 30 40 50 60 MEQQDQHLLA NDKKLNEKFL DDVFQILKKI ILECKTGNGK VIDFKTPDQL IKEIDLTLPL 70 80 90 100 110 120 KGQSDEEIIN FIKLVDKYSV KTSHSHFFNN LFGGSNEYSL AGDYFTSTIN GSMYTYEMAP 130 140 150 160 170 180 VFNFMENAIQ QLFAERYLKW STIDGVFCPG GSQSNFYGIL AARQHKYPEF KRKGLRALPD 190 200 210 220 230 240 LKLFTSELAH YSIEKGAIML GFGLDSVVKI ACDEEGRMIP EEFEKEIQKC IQEGSVPLMV 250 260 270 280 290 300 NLTCGTTVFG VVDPINKCTE IAQKYNMWVH IDGCWGGHLI FLEEFRNKYS LISQADSFAW 310 320 330 340 350 360 DAHKLFNVPQ QCTAFFTRHV GLLHEANALG SDYLFMKDKK LYDATKYDSG DKTYQCARHI 370 380 390 400 410 420 DVFKFWIYWK HFGTLGLEQI VADSLETTKY FAQLVKDHPN CELINEPEYV SVSFFYYPDS 430 440 450 460 470 480 FLKRKELGED KTEKFWEDMH NIPPIIKAKM VEQGTMMVAY QKQNQKSIQR KNFFRFIFTA 490 500 DKGKEEAQFA LNEIHRLGKD L

References

[1]

"Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote." Eisen J.A., Coyne R.S., Wu M., Wu D., Thiagarajan M., Wortman J.R., Badger J.H., Ren Q., Amedeo P., Jones K.M., Tallon L.J., Delcher A.L., Salzberg S.L., Silva J.C., Haas B.J., Majoros W.H., Farzad M., Carlton J.M. , Smith R.K. Jr., Garg J., Pearlman R.E., Karrer K.M., Sun L., Manning G., Elde N.C., Turkewitz A.P., Asai D.J., Wilkes D.E., Wang Y., Cai H., Collins K., Stewart B.A., Lee S.R., Wilamowska K., Weinberg Z., Ruzzo W.L., Wloga D., Gaertig J., Frankel J., Tsao C.-C., Gorovsky M.A., Keeling P.J., Waller R.F., Patron N.J., Cherry J.M., Stover N.A., Krieger C.J., del Toro C., Ryder H.F., Williamson S.C., Barbeau R.A., Hamilton E.P., Orias E. PLoS Biol. 4:1620-1642(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SB210.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG662651 Genomic DNA. Translation: EAR98380.2.
RefSeq	XP_001018625.2. XM_001018625.2.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7846854.
KEGG	tet:TTHERM_00289080.
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

I7LVK0_TETTS

Accession

Primary (citable) accession number: I7LVK0

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2012
Last sequence update:	October 3, 2012
Last modified:	March 6, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)