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I7GYF8 (I7GYF8_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:HLA-C EMBL BAM29372.1
OrganismHomo sapiens (Human) EMBL BAM29372.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length273 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the MHC class I family. RuleBase RU004439

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS027648

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAM29372.1
Non-terminal residue2731 EMBL BAM29372.1

Sequences

Sequence LengthMass (Da)Tools
I7GYF8 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: 9AB37A9E1E49EA6A

FASTA27331,401
        10         20         30         40         50         60 
SHSMRYFDTA VSRPGRGEPR FISVGYVDDT QFVRFDSDAA SPRGEPRAPW VEQEGPEYWD 

        70         80         90        100        110        120 
RETQKYKRQA QADRVSLRNL RGYYNQSEDG SHTLQRMSGC DLGPDGRLLR GYDQSAYDGK 

       130        140        150        160        170        180 
DYIALNEDLR SWTAADTAAQ ITQRKLEAAR EAEQLRAYLE GLCVEWLRRY LENGKETLQR 

       190        200        210        220        230        240 
AEPPKTHVTH HPLSDHEATL RCWALGFYPA EITLTWQRDG EDQTQDTELV ETRPAGDGTF 

       250        260        270 
QKWAAVVVPS GQEQRYTCHM QHEGLQEPLT LSW 

« Hide

References

[1]"HLA-JMDP-C-020."
Shimizu M., Nakajima F., Tadokoro K.
Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB735460 Genomic DNA. Translation: BAM29372.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.30.500.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003597. Ig_C1-set.
IPR011161. MHC_I-like_Ag-recog.
IPR011162. MHC_I/II-like_Ag-recog.
IPR027648. MHC_I_a.
IPR001039. MHC_I_a_a1/a2.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00129. MHC_I. 1 hit.
[Graphical view]
PRINTSPR01638. MHCCLASSI.
SMARTSM00407. IGc1. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSHLA-C. human.
NextBio35534635.

Entry information

Entry nameI7GYF8_HUMAN
AccessionPrimary (citable) accession number: I7GYF8
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: October 16, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.