ID   I7GFM1_MYCS2            Unreviewed;       349 AA.
AC   I7GFM1;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 53.
DE   SubName: Full=DNA primase small subunit {ECO:0000313|EMBL:AFP42566.1};
DE            EC=6.5.1.1 {ECO:0000313|EMBL:AFP42566.1};
GN   OrderedLocusNames=MSMEI_6136 {ECO:0000313|EMBL:AFP42566.1};
OS   Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS   smegmatis).
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae;
OC   Mycolicibacterium.
OX   NCBI_TaxID=246196 {ECO:0000313|EMBL:AFP42566.1, ECO:0000313|Proteomes:UP000006158};
RN   [1] {ECO:0000313|EMBL:AFP42566.1, ECO:0000313|Proteomes:UP000006158}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155 {ECO:0000313|Proteomes:UP000006158};
RX   PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA   Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA   Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.M.;
RT   "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT   mutations or sequencing errors?";
RL   Genome Biol. 8:R20.1-R20.9(2007).
RN   [2] {ECO:0000313|EMBL:AFP42566.1, ECO:0000313|Proteomes:UP000006158}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155 {ECO:0000313|Proteomes:UP000006158};
RX   PubMed=18955433; DOI=10.1101/gr.081901.108;
RA   Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.M.,
RA   Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT   "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT   and a new MS-based protocol.";
RL   Genome Res. 19:128-135(2009).
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DR   EMBL; CP001663; AFP42566.1; -; Genomic_DNA.
DR   RefSeq; WP_014878612.1; NZ_SIJM01000013.1.
DR   AlphaFoldDB; I7GFM1; -.
DR   GeneID; 66737583; -.
DR   KEGG; msg:MSMEI_6136; -.
DR   PATRIC; fig|246196.56.peg.6261; -.
DR   Proteomes; UP000006158; Chromosome.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   CDD; cd04865; LigD_Pol_like_2; 1.
DR   Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   NCBIfam; TIGR02778; ligD_pol; 1.
DR   PANTHER; PTHR42705:SF3; -; 1.
DR   PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR   Pfam; PF21686; LigD_Prim-Pol; 1.
PE   4: Predicted;
KW   Ligase {ECO:0000313|EMBL:AFP42566.1}.
FT   DOMAIN          33..287
FT                   /note="DNA ligase D polymerase"
FT                   /evidence="ECO:0000259|Pfam:PF21686"
FT   REGION          311..349
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        333..349
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   349 AA;  39233 MW;  4EE4B208A3F58530 CRC64;
     MASAATELDV DGVKVRFTNP DKVYFPKLGK NGTKGKLVEY YLSVASGPML ALLRDRPVHL
     QRFPDGIEGE EIYQKRVPQK HPDYLETCVV TFPSGRTADA LKITHPSSII WAAQMGTVTL
     HPWQVRCPDT EHPDELRVDL DPQPGTGFKE ARTVACDVLK PLLDELGLVG YPKTSGGRGV
     HVFLRIKPQW DFIEVRRAGI ALAREVERRA PDAVTTSWWK EERGERLFID YNQNARDRTF
     ASAYSVRKTP IATVSMPLSW DELRNADPDD YTMNTVPDLL AGRDDPWADI DSVQQSLGPL
     LDLVAADEER GLGDLPYPPN YPKMPGEPPR VQPSKKVAEH WDEQGNRKQ
//