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I7GFM1

- I7GFM1_MYCS2

UniProt

I7GFM1 - I7GFM1_MYCS2

Protein
Submitted name:

DNA primase small subunit

Gene

MSMEI_6136

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (03 Oct 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA ligase (ATP) activity Source: UniProtKB-EC
    2. DNA primase activity Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA primase small subunitImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:MSMEI_6136Imported
    OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)Imported
    Taxonomic identifieri246196 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000006158: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiFHPWPVR.

    Family and domain databases

    InterProiIPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view]
    PfamiPF01896. DNA_primase_S. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I7GFM1-1 [UniParc]FASTAAdd to Basket

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    MASAATELDV DGVKVRFTNP DKVYFPKLGK NGTKGKLVEY YLSVASGPML    50
    ALLRDRPVHL QRFPDGIEGE EIYQKRVPQK HPDYLETCVV TFPSGRTADA 100
    LKITHPSSII WAAQMGTVTL HPWQVRCPDT EHPDELRVDL DPQPGTGFKE 150
    ARTVACDVLK PLLDELGLVG YPKTSGGRGV HVFLRIKPQW DFIEVRRAGI 200
    ALAREVERRA PDAVTTSWWK EERGERLFID YNQNARDRTF ASAYSVRKTP 250
    IATVSMPLSW DELRNADPDD YTMNTVPDLL AGRDDPWADI DSVQQSLGPL 300
    LDLVAADEER GLGDLPYPPN YPKMPGEPPR VQPSKKVAEH WDEQGNRKQ 349
    Length:349
    Mass (Da):39,233
    Last modified:October 3, 2012 - v1
    Checksum:i4EE4B208A3F58530
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001663 Genomic DNA. Translation: AFP42566.1.
    RefSeqiWP_014878612.1. NC_018289.1.
    YP_006570861.1. NC_018289.1.

    Genome annotation databases

    EnsemblBacteriaiAFP42566; AFP42566; MSMEI_6136.
    KEGGimsg:MSMEI_6136.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001663 Genomic DNA. Translation: AFP42566.1 .
    RefSeqi WP_014878612.1. NC_018289.1.
    YP_006570861.1. NC_018289.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFP42566 ; AFP42566 ; MSMEI_6136 .
    KEGGi msg:MSMEI_6136.

    Phylogenomic databases

    KOi K01971.
    OMAi FHPWPVR.

    Family and domain databases

    InterProi IPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view ]
    Pfami PF01896. DNA_primase_S. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?"
      Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C., Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.
      Genome Biol. 8:R20.1-R20.9(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700084 / mc(2)155Imported.
    2. "Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol."
      Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M., Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.
      Genome Res. 19:128-135(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiI7GFM1_MYCS2
    AccessioniPrimary (citable) accession number: I7GFM1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2012
    Last sequence update: October 3, 2012
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3