I7GFM1 (I7GFM1_MYCS2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA primase small subunit EMBL AFP42566.1
EC=6.5.1.1 EMBL AFP42566.1

Gene names

Ordered Locus Names:

MSMEI_6136 EMBL AFP42566.1

Organism

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [Complete proteome] [HAMAP] EMBL AFP42566.1

Taxonomic identifier

246196 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium smegmatis

Protein attributes

Sequence length	349 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AFP42566.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC DNA primase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I7GFM1 [UniParc]. Last modified October 3, 2012. Version 1. Checksum: 4EE4B208A3F58530	FASTA	349	39,233
	10 20 30 40 50 60 MASAATELDV DGVKVRFTNP DKVYFPKLGK NGTKGKLVEY YLSVASGPML ALLRDRPVHL 70 80 90 100 110 120 QRFPDGIEGE EIYQKRVPQK HPDYLETCVV TFPSGRTADA LKITHPSSII WAAQMGTVTL 130 140 150 160 170 180 HPWQVRCPDT EHPDELRVDL DPQPGTGFKE ARTVACDVLK PLLDELGLVG YPKTSGGRGV 190 200 210 220 230 240 HVFLRIKPQW DFIEVRRAGI ALAREVERRA PDAVTTSWWK EERGERLFID YNQNARDRTF 250 260 270 280 290 300 ASAYSVRKTP IATVSMPLSW DELRNADPDD YTMNTVPDLL AGRDDPWADI DSVQQSLGPL 310 320 330 340 LDLVAADEER GLGDLPYPPN YPKMPGEPPR VQPSKKVAEH WDEQGNRKQ

References

[1]	"Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?" Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C., Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.M. Genome Biol. 8:R20-R20(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700084 / mc(2)155.
[2]	"Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol." Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.M., Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O. Genome Res. 19:128-135(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700084 / mc(2)155.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001663 Genomic DNA. Translation: AFP42566.1.
RefSeq	YP_006570861.1. NC_018289.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFP42566; AFP42566; MSMEI_6136.
GeneID	13427465.
KEGG	msg:MSMEI_6136.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
OMA	PPEYPKM.
Family and domain databases
InterPro	IPR002755. DNA_primase_S. IPR014145. LigD_pol. [Graphical view]
Pfam	PF01896. DNA_primase_S. 1 hit. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

I7GFM1_MYCS2

Accession

Primary (citable) accession number: I7GFM1

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2012
Last sequence update:	October 3, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)