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I7GFM1 (I7GFM1_MYCS2) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length349 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFP42566.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionDNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

DNA primase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I7GFM1 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: 4EE4B208A3F58530

FASTA34939,233
        10         20         30         40         50         60 
MASAATELDV DGVKVRFTNP DKVYFPKLGK NGTKGKLVEY YLSVASGPML ALLRDRPVHL 

        70         80         90        100        110        120 
QRFPDGIEGE EIYQKRVPQK HPDYLETCVV TFPSGRTADA LKITHPSSII WAAQMGTVTL 

       130        140        150        160        170        180 
HPWQVRCPDT EHPDELRVDL DPQPGTGFKE ARTVACDVLK PLLDELGLVG YPKTSGGRGV 

       190        200        210        220        230        240 
HVFLRIKPQW DFIEVRRAGI ALAREVERRA PDAVTTSWWK EERGERLFID YNQNARDRTF 

       250        260        270        280        290        300 
ASAYSVRKTP IATVSMPLSW DELRNADPDD YTMNTVPDLL AGRDDPWADI DSVQQSLGPL 

       310        320        330        340 
LDLVAADEER GLGDLPYPPN YPKMPGEPPR VQPSKKVAEH WDEQGNRKQ 

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References

[1]"Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?"
Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C., Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.M.
Genome Biol. 8:R20.1-R20.9(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700084 / mc(2)155.
[2]"Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol."
Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.M., Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.
Genome Res. 19:128-135(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700084 / mc(2)155.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001663 Genomic DNA. Translation: AFP42566.1.
RefSeqYP_006570861.1. NC_018289.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFP42566; AFP42566; MSMEI_6136.
KEGGmsg:MSMEI_6136.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAFHPWPVR.

Family and domain databases

InterProIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI7GFM1_MYCS2
AccessionPrimary (citable) accession number: I7GFM1
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: July 9, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)