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I7GFM1

- I7GFM1_MYCS2

UniProt

I7GFM1 - I7GFM1_MYCS2

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Protein
Submitted name:

DNA primase small subunit

Gene

MSMEI_6136

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA ligase (ATP) activity Source: UniProtKB-EC
  2. DNA primase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA primase small subunitImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:MSMEI_6136Imported
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)Imported
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000006158: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiFHPWPVR.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

I7GFM1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MASAATELDV DGVKVRFTNP DKVYFPKLGK NGTKGKLVEY YLSVASGPML
60 70 80 90 100
ALLRDRPVHL QRFPDGIEGE EIYQKRVPQK HPDYLETCVV TFPSGRTADA
110 120 130 140 150
LKITHPSSII WAAQMGTVTL HPWQVRCPDT EHPDELRVDL DPQPGTGFKE
160 170 180 190 200
ARTVACDVLK PLLDELGLVG YPKTSGGRGV HVFLRIKPQW DFIEVRRAGI
210 220 230 240 250
ALAREVERRA PDAVTTSWWK EERGERLFID YNQNARDRTF ASAYSVRKTP
260 270 280 290 300
IATVSMPLSW DELRNADPDD YTMNTVPDLL AGRDDPWADI DSVQQSLGPL
310 320 330 340
LDLVAADEER GLGDLPYPPN YPKMPGEPPR VQPSKKVAEH WDEQGNRKQ
Length:349
Mass (Da):39,233
Last modified:October 3, 2012 - v1
Checksum:i4EE4B208A3F58530
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001663 Genomic DNA. Translation: AFP42566.1.
RefSeqiYP_006570861.1. NC_018289.1.

Genome annotation databases

EnsemblBacteriaiAFP42566; AFP42566; MSMEI_6136.
KEGGimsg:MSMEI_6136.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001663 Genomic DNA. Translation: AFP42566.1 .
RefSeqi YP_006570861.1. NC_018289.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFP42566 ; AFP42566 ; MSMEI_6136 .
KEGGi msg:MSMEI_6136.

Phylogenomic databases

KOi K01971.
OMAi FHPWPVR.

Family and domain databases

InterProi IPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view ]
Pfami PF01896. DNA_primase_S. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?"
    Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C., Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.
    Genome Biol. 8:R20.1-R20.9(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700084 / mc(2)155Imported.
  2. "Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol."
    Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M., Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.
    Genome Res. 19:128-135(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiI7GFM1_MYCS2
AccessioniPrimary (citable) accession number: I7GFM1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: October 29, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3