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I7GFM1

- I7GFM1_MYCS2

UniProt

I7GFM1 - I7GFM1_MYCS2

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Protein
Submitted name: DNA primase small subunit
Gene
MSMEI_6136
Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA ligase (ATP) activity Source: UniProtKB-EC
  2. DNA primase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA primase small subunitImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:MSMEI_6136Imported
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)Imported
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000006158: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiFHPWPVR.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

I7GFM1-1 [UniParc]FASTAAdd to Basket

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MASAATELDV DGVKVRFTNP DKVYFPKLGK NGTKGKLVEY YLSVASGPML    50
ALLRDRPVHL QRFPDGIEGE EIYQKRVPQK HPDYLETCVV TFPSGRTADA 100
LKITHPSSII WAAQMGTVTL HPWQVRCPDT EHPDELRVDL DPQPGTGFKE 150
ARTVACDVLK PLLDELGLVG YPKTSGGRGV HVFLRIKPQW DFIEVRRAGI 200
ALAREVERRA PDAVTTSWWK EERGERLFID YNQNARDRTF ASAYSVRKTP 250
IATVSMPLSW DELRNADPDD YTMNTVPDLL AGRDDPWADI DSVQQSLGPL 300
LDLVAADEER GLGDLPYPPN YPKMPGEPPR VQPSKKVAEH WDEQGNRKQ 349
Length:349
Mass (Da):39,233
Last modified:October 3, 2012 - v1
Checksum:i4EE4B208A3F58530
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001663 Genomic DNA. Translation: AFP42566.1.
RefSeqiWP_014878612.1. NC_018289.1.
YP_006570861.1. NC_018289.1.

Genome annotation databases

EnsemblBacteriaiAFP42566; AFP42566; MSMEI_6136.
KEGGimsg:MSMEI_6136.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001663 Genomic DNA. Translation: AFP42566.1 .
RefSeqi WP_014878612.1. NC_018289.1.
YP_006570861.1. NC_018289.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFP42566 ; AFP42566 ; MSMEI_6136 .
KEGGi msg:MSMEI_6136.

Phylogenomic databases

KOi K01971.
OMAi FHPWPVR.

Family and domain databases

InterProi IPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view ]
Pfami PF01896. DNA_primase_S. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?"
    Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C., Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.M.
    Genome Biol. 8:R20.1-R20.9(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700084 / mc(2)155.
  2. "Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol."
    Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.M., Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.
    Genome Res. 19:128-135(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700084 / mc(2)155.

Entry informationi

Entry nameiI7GFM1_MYCS2
AccessioniPrimary (citable) accession number: I7GFM1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: September 3, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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