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Protein
Submitted name:

Aspartate aminotransferase AspC

Gene

aspC

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Aspartate aminotransferase AspCImported (EC:2.6.1.1Imported)
Gene namesi
Name:aspCImported
Ordered Locus Names:MSMEI_0671Imported
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)Imported
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
ProteomesiUP000006158 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi246196.MSMEG_0688.

Family & Domainsi

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

I7G268-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDSDETMERV TTHQLPWQST GEHRKPRTFT QSTKLQDVLY EIRGPVHEHA
60 70 80 90 100
SRLEAEGHRI LKLNIGNPAP FGFEAPDVIM RDIIQALPTA QGYSDSKGIL
110 120 130 140 150
SARRAVFTRY ELVEGFPKFD VDDVYLGNGV SELITMTLQA LLDNGDQVLI
160 170 180 190 200
PAPDYPLWTA STSLAGGTPV HYLCDETQGW NPDVADIESK ITERTKAIVV
210 220 230 240 250
INPNNPTGAV YSRETLEQIV DLARKHQLLL LADEIYDKIL YDDAKHISLA
260 270 280 290 300
TLAPDLLCLT FNGLSKAYRV AGYRSGWLVI TGPKEHATSF IEGISLLANM
310 320 330 340 350
RLCPNVPAQH AIQVALGGHQ SIDALVLPGG RLLEQRDVAW EKLNEIPGVS
360 370 380 390 400
CVKPRGALYA FPRLDPEVYD IHDDEQLVLD LLLQEKILLT QGTGFNWPTP
410 420 430
DHLRIVTLPW ARDLASAIER LGNFLASYRQ
Length:430
Mass (Da):47,868
Last modified:October 3, 2012 - v1
Checksum:i609C5CD5FA0A7697
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001663 Genomic DNA. Translation: AFP37151.1.
RefSeqiWP_014876840.1. NC_018289.1.
YP_006565446.1. NC_018289.1.

Genome annotation databases

EnsemblBacteriaiAFP37151; AFP37151; MSMEI_0671.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001663 Genomic DNA. Translation: AFP37151.1.
RefSeqiWP_014876840.1. NC_018289.1.
YP_006565446.1. NC_018289.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246196.MSMEG_0688.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFP37151; AFP37151; MSMEI_0671.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?"
    Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C., Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.
    Genome Biol. 8:R20.1-R20.9(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700084 / mc(2)155Imported.
  2. "Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol."
    Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M., Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.
    Genome Res. 19:128-135(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiI7G268_MYCS2
AccessioniPrimary (citable) accession number: I7G268
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: June 24, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.