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I7F280 (I7F280_PHAIB) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PGA1_262p00500 EMBL AFO93332.1
Encoded onPlasmid pPGA1_262 EMBL AFO93332.1
OrganismPhaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) [Complete proteome] [HAMAP] EMBL AFO93332.1
Taxonomic identifier391619 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaePhaeobacter

Protein attributes

Sequence length518 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
I7F280 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: D4B238FAA9F9E884

FASTA51857,826
        10         20         30         40         50         60 
MQAFAELLEQ LAFTPSRNGK IAHLTTAFAT IPDPERGYAL AAITGDLALR NVTPSLLRGL 

        70         80         90        100        110        120 
VAEETDPELF RLSYDFVGDL AETVALIWPH SDTVIDLSLT DAVHELTNTA KAQLPALIAR 

       130        140        150        160        170        180 
RLSQMTPTQR YAYLKLATGG LRVGVSARLA RSALAQFGDV DVTEIEELWH GLTPPYLPLF 

       190        200        210        220        230        240 
AWLEGGEKPV NLAAAPFRPV MLSTGTDLED LASLSPADFI AEWKWDGIRV QAVNDKGTRR 

       250        260        270        280        290        300 
LYSRTGEDIS GSFPDVIEAL NFDGVLDGEL LVKRGDSVAP FGDLQKRLGR KKVGKAMLAS 

       310        320        330        340        350        360 
HPAALRVYDV LYWNGEDLRP RTLADRQIHL KTCVCDLRDP RIDLSLPLDF ETWEDLAKLR 

       370        380        390        400        410        420 
ADPPNSVIEG VMIKRRDSAY IAGRKRGYWF KWKRDPMLVD AVMLYAQRGH GKRSGYYSDF 

       430        440        450        460        470        480 
TFGVWNDDQL VPVGKAYFGF TDAELKELDR FVRNNTIDRF GPVRAVKPEL VLEVAFEGLN 

       490        500        510 
ESSRHKSGLA MRFPRINRIR TDKPALEAGT LAELRAFL 

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References

[1]"Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life."
Thole S., Kalhoefer D., Voget S., Berger M., Engelhardt T., Liesegang H., Wollherr A., Kjelleberg S., Daniel R., Simon M., Thomas T., Brinkhoff T.
ISME J. 6:2229-2244(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002977 Genomic DNA. Translation: AFO93332.1.
RefSeqYP_006575051.1. NC_018291.1.

3D structure databases

ProteinModelPortalI7F280.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFO93332; AFO93332; PGA1_262p00500.
GeneID13420362.
KEGGpga:PGA1_262p00500.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPGAL391619:GLIE-3662-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI7F280_PHAIB
AccessionPrimary (citable) accession number: I7F280
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: April 16, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)