SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

I7F280

- I7F280_PHAIB

UniProt

I7F280 - I7F280_PHAIB

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Putative ATP dependent DNA ligase

Gene
PGA1_262p00500
Organism
Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPGAL391619:GLIE-3662-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:PGA1_262p00500Imported
Encoded oniPlasmid pPGA1_262Imported
OrganismiPhaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107)Imported
Taxonomic identifieri391619 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaePhaeobacter
ProteomesiUP000002914: Plasmid pPGA1_262

Structurei

3D structure databases

ProteinModelPortaliI7F280.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I7F280-1 [UniParc]FASTAAdd to Basket

« Hide

MQAFAELLEQ LAFTPSRNGK IAHLTTAFAT IPDPERGYAL AAITGDLALR    50
NVTPSLLRGL VAEETDPELF RLSYDFVGDL AETVALIWPH SDTVIDLSLT 100
DAVHELTNTA KAQLPALIAR RLSQMTPTQR YAYLKLATGG LRVGVSARLA 150
RSALAQFGDV DVTEIEELWH GLTPPYLPLF AWLEGGEKPV NLAAAPFRPV 200
MLSTGTDLED LASLSPADFI AEWKWDGIRV QAVNDKGTRR LYSRTGEDIS 250
GSFPDVIEAL NFDGVLDGEL LVKRGDSVAP FGDLQKRLGR KKVGKAMLAS 300
HPAALRVYDV LYWNGEDLRP RTLADRQIHL KTCVCDLRDP RIDLSLPLDF 350
ETWEDLAKLR ADPPNSVIEG VMIKRRDSAY IAGRKRGYWF KWKRDPMLVD 400
AVMLYAQRGH GKRSGYYSDF TFGVWNDDQL VPVGKAYFGF TDAELKELDR 450
FVRNNTIDRF GPVRAVKPEL VLEVAFEGLN ESSRHKSGLA MRFPRINRIR 500
TDKPALEAGT LAELRAFL 518
Length:518
Mass (Da):57,826
Last modified:October 3, 2012 - v1
Checksum:iD4B238FAA9F9E884
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002977 Genomic DNA. Translation: AFO93332.1.
RefSeqiWP_014881681.1. NC_018291.1.
YP_006575051.1. NC_018291.1.

Genome annotation databases

EnsemblBacteriaiAFO93332; AFO93332; PGA1_262p00500.
GeneIDi13420362.
KEGGipga:PGA1_262p00500.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002977 Genomic DNA. Translation: AFO93332.1 .
RefSeqi WP_014881681.1. NC_018291.1.
YP_006575051.1. NC_018291.1.

3D structure databases

ProteinModelPortali I7F280.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFO93332 ; AFO93332 ; PGA1_262p00500 .
GeneIDi 13420362.
KEGGi pga:PGA1_262p00500.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci PGAL391619:GLIE-3662-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life."
    Thole S., Kalhoefer D., Voget S., Berger M., Engelhardt T., Liesegang H., Wollherr A., Kjelleberg S., Daniel R., Simon M., Thomas T., Brinkhoff T.
    ISME J. 6:2229-2244(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiI7F280_PHAIB
AccessioniPrimary (citable) accession number: I7F280
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: September 3, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported

External Data

Dasty 3

Similar proteinsi