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I7E1B6 (I7E1B6_AMYMD) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP-dependent DNA ligase EMBL AFO77683.1
Gene names
Name:lig EMBL AFO77683.1
ORF Names:AMES_4147 EMBL AFO77683.1
OrganismAmycolatopsis mediterranei S699 EMBL AFO77683.1
Taxonomic identifier713604 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Amycolatopsis ›

Protein attributes

Sequence length299 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFO77683.1
Gene Ontology (GO)
   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I7E1B6 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: 3856EFC02A18360E

FASTA29933,109
        10         20         30         40         50         60 
MQVGERRLTL SNLEKVLYPR PGFTKGEVLD YYTRIAPVLL PHVRDRAMTF VRFPEGVTGT 

        70         80         90        100        110        120 
SFFEKDVSRH APDWVRTARL TVGGRGKEPE IVAYPLINDL PELVWAANLA ALELHVHQWT 

       130        140        150        160        170        180 
VGPGDERSTP DRLVFDLDPG PGATVVDCCR VAERLHDVLV EDGLTPVAKT SGSKGMQLYA 

       190        200        210        220        230        240 
GIVTTDGGEP SQYAKALAER LAAETPDLVV ARMTKNLRPG KVFIDWSQNN PFKTTVAPYS 

       250        260        270        280        290 
LRGRDEPTVS APVTWDEVRA CRHVTHLRFT AGEVLARVED IGDLFADLER TRVPILAFG

« Hide

References

[1]"Complete Genome Sequence of Amycolatopsis mediterranei S699 Based on De Novo Assembly via a Combinatorial Sequencing Strategy."
Tang B., Zhao W., Zheng H., Zhuo Y., Zhang L., Zhao G.P.
J. Bacteriol. 194:5699-5700(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S699 EMBL AFO77683.1.
[2]Biao T.
Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S699 EMBL AFO77683.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003729 Genomic DNA. Translation: AFO77683.1.
RefSeqYP_006550628.1. NC_018266.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFO77683; AFO77683; AMES_4147.
GeneID13415151.
KEGGamm:AMES_4147.

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI7E1B6_AMYMD
AccessionPrimary (citable) accession number: I7E1B6
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: April 3, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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