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I7DXB0

- I7DXB0_PHAIB

UniProt

I7DXB0 - I7DXB0_PHAIB

Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component SucA

Gene

sucA

Organism
Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (03 Oct 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Enzyme and pathway databases

    BioCyciPGAL391619:GLIE-355-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2-oxoglutarate dehydrogenase E1 component SucAImported (EC:1.2.4.2Imported)
    Gene namesi
    Name:sucAImported
    Ordered Locus Names:PGA1_c03600Imported
    OrganismiPhaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107)Imported
    Taxonomic identifieri391619 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaePhaeobacter
    ProteomesiUP000002914: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliI7DXB0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK00164.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I7DXB0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTDQSPNELF HASSFMQGHN AEYLEQLYAQ YANDPNAVDA AWAEFFRQMG    50
    DAELDVKAEA AGPSWARADW PPAPNDDLTG ALTGEWPAPA EAKGAGKKIK 100
    EQAAAKGVEV TDDQVQRAVL DSIRALMLIR AYRIRGHLAA NLDPLGMREE 150
    AQHPELDPRT YGFTEADMDR PIFIDNVLGL QVASMRQIVS IVKRTYCGTF 200
    ALQYMHISDP EQASWLKERI EGYDKEITFT REGRKAILNK MVEAEGFEKF 250
    LHVKYMGTKR FGLDGGESLI PAMEQIIKRG GALGIRDIVI GMPHRGRLSV 300
    LANVMQKPYK AIFNEFQGGS FKPEDVDGSG DVKYHLGASS DREFDGNSVH 350
    LSLTANPSHL EAVNPVVLGK VRAKQDQLKD SERTKVLPIL LHGDAAFAGQ 400
    GVVAECFALS GLRGHKAGGT MHIVVNNQIG FTTAPHFSRS SPYPTDNALV 450
    VEAPIFHVNG DDPEAVVHAA RVATEFRQKF HKDVVLDIFC YRRFGHNEGD 500
    EPMFTNPLMY KKIKGHKTTL SLYTERLVKD GLIPEGEIED MKASFQARLN 550
    EEFEAGKNFK PNKADWLDGR WSHLDKKDTD YQRGQTSVSP ETFKEVGTAL 600
    SRVPEGFPVH KTIGRFLDAR AKMVDSGEGI DWATGEALAF GSLLTEGYPV 650
    RLSGQDATRG TFSQRHSGIV NQNTEERYYP LNNIRSGQSH YEVIDSALSE 700
    YAVLGFEYGY SLAEPNALTL WEAQFGDFAN GAQIMFDQFI SSGESKWLRM 750
    SGLVCLLPHG FEGQGPEHSS ARLERFLQMC GQDNWIVANC TTPANYFHIL 800
    RRQLHRTFRK PLIMMTPKSL LRHKLAVSKA EEFTTGSSFH RVLWDDAQHG 850
    NSDTKLVADD KIKRVVLCSG KVYYDLLEER DARGLDDVYL MRIEQYYPFP 900
    AISLVKELER FKGAEVVWCQ EEPKNQGAWS FIEPNIEWVL TRIGAKHSRP 950
    TYVGRATSAS PATGLASEHK AQQAALVNEA LSIEG 985
    Length:985
    Mass (Da):109,918
    Last modified:October 3, 2012 - v1
    Checksum:i1464050F5E89B6E1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002976 Genomic DNA. Translation: AFO90094.1.
    RefSeqiYP_006571813.1. NC_018290.1.

    Genome annotation databases

    EnsemblBacteriaiAFO90094; AFO90094; PGA1_c03600.
    GeneIDi13421285.
    KEGGipga:PGA1_c03600.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002976 Genomic DNA. Translation: AFO90094.1 .
    RefSeqi YP_006571813.1. NC_018290.1.

    3D structure databases

    ProteinModelPortali I7DXB0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFO90094 ; AFO90094 ; PGA1_c03600 .
    GeneIDi 13421285.
    KEGGi pga:PGA1_c03600.

    Phylogenomic databases

    KOi K00164.

    Enzyme and pathway databases

    BioCyci PGAL391619:GLIE-355-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life."
      Thole S., Kalhoefer D., Voget S., Berger M., Engelhardt T., Liesegang H., Wollherr A., Kjelleberg S., Daniel R., Simon M., Thomas T., Brinkhoff T.
      ISME J. 6:2229-2244(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 17395Imported.

    Entry informationi

    Entry nameiI7DXB0_PHAIB
    AccessioniPrimary (citable) accession number: I7DXB0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2012
    Last sequence update: October 3, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3