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I7DQQ6

- I7DQQ6_PHAG2

UniProt

I7DQQ6 - I7DQQ6_PHAG2

Protein

Superoxide dismutase

Gene

sodB

Organism
Phaeobacter gallaeciensis (strain 2.10) (Roseobacter gallaeciensis)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 11 (01 Oct 2014)
      Sequence version 1 (03 Oct 2012)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciPGAL383629:GLID-1817-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodBImported
    Ordered Locus Names:PGA2_c18180Imported
    OrganismiPhaeobacter gallaeciensis (strain 2.10) (Roseobacter gallaeciensis)Imported
    Taxonomic identifieri383629 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaePhaeobacter
    ProteomesiUP000002913: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    KOiK04564.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I7DQQ6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAFELPDLPY AHDALASKGM SAETLEYHHD LHHKAYVDNG NKLIAGTEWD    50
    GKSMEEIIKG TYDANAVAQS GIFNNISQLW NHNQFWEMMG PGESKMPGEL 100
    EKALVDSFGS VDTFKEEFSA AGAGQFGSGW AWLVKDTDGG LKVTKTENGV 150
    NPVCFGQTAL LGCDVWEHSY YIDFRNKRPA YLTNFLDNLV NWENVASRM 199
    Length:199
    Mass (Da):22,179
    Last modified:October 3, 2012 - v1
    Checksum:i0EF226264478D20B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002972 Genomic DNA. Translation: AFO87814.1.
    RefSeqiYP_006563059.1. NC_018286.1.

    Genome annotation databases

    EnsemblBacteriaiAFO87814; AFO87814; PGA2_c18180.
    GeneIDi13432703.
    KEGGipgl:PGA2_c18180.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002972 Genomic DNA. Translation: AFO87814.1 .
    RefSeqi YP_006563059.1. NC_018286.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFO87814 ; AFO87814 ; PGA2_c18180 .
    GeneIDi 13432703.
    KEGGi pgl:PGA2_c18180.

    Phylogenomic databases

    KOi K04564.

    Enzyme and pathway databases

    BioCyci PGAL383629:GLID-1817-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life."
      Thole S., Kalhoefer D., Voget S., Berger M., Engelhardt T., Liesegang H., Wollherr A., Kjelleberg S., Daniel R., Simon M., Thomas T., Brinkhoff T.
      ISME J. 6:2229-2244(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2.10Imported.

    Entry informationi

    Entry nameiI7DQQ6_PHAG2
    AccessioniPrimary (citable) accession number: I7DQQ6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2012
    Last sequence update: October 3, 2012
    Last modified: October 1, 2014
    This is version 11 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3