I7C7K5 (I7C7K5_PSEPU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AFO47694.1

Gene names

ORF Names:

T1E_1846 EMBL AFO47694.1

Organism

Pseudomonas putida DOT-T1E EMBL AFO47694.1

Taxonomic identifier

1196325 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas putida group › Pseudomonas putida

Protein attributes

Sequence length	552 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AFO47694.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I7C7K5 [UniParc]. Last modified October 3, 2012. Version 1. Checksum: 227A24B8F9887F8D	FASTA	552	62,039
	10 20 30 40 50 60 MKAFATLFLR LDATTSSNAK LEALRDYFDM APADDAAWAV YFLAGGRPRQ LVPTRLLREL 70 80 90 100 110 120 ATALAGLPDW LFEESYQAVG DLAETISLLL PLHADGNDEG LATWVEQHLL PLRGLAPEQV 130 140 150 160 170 180 RQRLPPLWAR LDRASLMLCL KLITGSFRVG VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD 190 200 210 220 230 240 IGHRPTAASY QRLIAPESAD EHNQRGGQPY PFFLAHPLQV SSDQFDTLLG PPSDWQIEWK 250 260 270 280 290 300 WDGIRAQVVK RDGQLWVWSR GEELVTERFP ELHGLAQTLP DGVVLDGEIL VWKPGETETE 310 320 330 340 350 360 LAVQPFALLQ QRIGRKTLGK KLLNDAPVVL QAYDLLEWQG DDWRSRPQHE RRSQLERLVD 370 380 390 400 410 420 EHPLAPVLLS PLLQGPDWAD LARQREQSRS LGVEGLMLKQ REALYGVGRT KDMGIWWKWK 430 440 450 460 470 480 IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA VWDAPAGTPG RALVPFAKAY SGLSDEEMRK 490 500 510 520 530 540 VDAIIRKTTV ETFGPVRSVT PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE 550 ADDLATLQAL LA

References

[1]

"Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome." Udaondo Z., Molina L., Daniels C., Gomez M.J., Molina-Henares M.A., Matilla M.A., Roca A., Fernandez M., Duque E., Segura A., Ramos J.L. Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DOT-T1E EMBL AFO47694.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003734 Genomic DNA. Translation: AFO47694.1.
RefSeq	YP_006532486.1. NC_018220.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFO47694; AFO47694; T1E_1846.
GeneID	13344129.
KEGG	ppx:T1E_1846.
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I7C7K5_PSEPU

Accession

Primary (citable) accession number: I7C7K5

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2012
Last sequence update:	October 3, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)