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I7C7K5

- I7C7K5_PSEPT

UniProt

I7C7K5 - I7C7K5_PSEPT

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

T1E_1846

Organism
Pseudomonas putida (strain DOT-T1E)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (03 Oct 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPPUT1196325:GLIV-1862-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:T1E_1846Imported
    OrganismiPseudomonas putida (strain DOT-T1E)Imported
    Taxonomic identifieri1196325 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000006503: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I7C7K5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAFATLFLR LDATTSSNAK LEALRDYFDM APADDAAWAV YFLAGGRPRQ    50
    LVPTRLLREL ATALAGLPDW LFEESYQAVG DLAETISLLL PLHADGNDEG 100
    LATWVEQHLL PLRGLAPEQV RQRLPPLWAR LDRASLMLCL KLITGSFRVG 150
    VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD IGHRPTAASY QRLIAPESAD 200
    EHNQRGGQPY PFFLAHPLQV SSDQFDTLLG PPSDWQIEWK WDGIRAQVVK 250
    RDGQLWVWSR GEELVTERFP ELHGLAQTLP DGVVLDGEIL VWKPGETETE 300
    LAVQPFALLQ QRIGRKTLGK KLLNDAPVVL QAYDLLEWQG DDWRSRPQHE 350
    RRSQLERLVD EHPLAPVLLS PLLQGPDWAD LARQREQSRS LGVEGLMLKQ 400
    REALYGVGRT KDMGIWWKWK IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA 450
    VWDAPAGTPG RALVPFAKAY SGLSDEEMRK VDAIIRKTTV ETFGPVRSVT 500
    PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE ADDLATLQAL 550
    LA 552
    Length:552
    Mass (Da):62,039
    Last modified:October 3, 2012 - v1
    Checksum:i227A24B8F9887F8D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003734 Genomic DNA. Translation: AFO47694.1.
    RefSeqiYP_006532486.1. NC_018220.1.

    Genome annotation databases

    EnsemblBacteriaiAFO47694; AFO47694; T1E_1846.
    GeneIDi13344129.
    KEGGippx:T1E_1846.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003734 Genomic DNA. Translation: AFO47694.1 .
    RefSeqi YP_006532486.1. NC_018220.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFO47694 ; AFO47694 ; T1E_1846 .
    GeneIDi 13344129.
    KEGGi ppx:T1E_1846.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci PPUT1196325:GLIV-1862-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome."
      Udaondo Z., Molina L., Daniels C., Gomez M.J., Molina-Henares M.A., Matilla M.A., Roca A., Fernandez M., Duque E., Segura A., Ramos J.L.
      Microb. Biotechnol. 6:598-611(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DOT-T1EImported.

    Entry informationi

    Entry nameiI7C7K5_PSEPT
    AccessioniPrimary (citable) accession number: I7C7K5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2012
    Last sequence update: October 3, 2012
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3