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I7C7K5 (I7C7K5_PSEPT) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:T1E_1846 EMBL AFO47694.1
OrganismPseudomonas putida (strain DOT-T1E) [Complete proteome] [HAMAP] EMBL AFO47694.1
Taxonomic identifier1196325 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
I7C7K5 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: 227A24B8F9887F8D

FASTA55262,039
        10         20         30         40         50         60 
MKAFATLFLR LDATTSSNAK LEALRDYFDM APADDAAWAV YFLAGGRPRQ LVPTRLLREL 

        70         80         90        100        110        120 
ATALAGLPDW LFEESYQAVG DLAETISLLL PLHADGNDEG LATWVEQHLL PLRGLAPEQV 

       130        140        150        160        170        180 
RQRLPPLWAR LDRASLMLCL KLITGSFRVG VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD 

       190        200        210        220        230        240 
IGHRPTAASY QRLIAPESAD EHNQRGGQPY PFFLAHPLQV SSDQFDTLLG PPSDWQIEWK 

       250        260        270        280        290        300 
WDGIRAQVVK RDGQLWVWSR GEELVTERFP ELHGLAQTLP DGVVLDGEIL VWKPGETETE 

       310        320        330        340        350        360 
LAVQPFALLQ QRIGRKTLGK KLLNDAPVVL QAYDLLEWQG DDWRSRPQHE RRSQLERLVD 

       370        380        390        400        410        420 
EHPLAPVLLS PLLQGPDWAD LARQREQSRS LGVEGLMLKQ REALYGVGRT KDMGIWWKWK 

       430        440        450        460        470        480 
IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA VWDAPAGTPG RALVPFAKAY SGLSDEEMRK 

       490        500        510        520        530        540 
VDAIIRKTTV ETFGPVRSVT PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE 

       550 
ADDLATLQAL LA 

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References

[1]"Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome."
Udaondo Z., Molina L., Daniels C., Gomez M.J., Molina-Henares M.A., Matilla M.A., Roca A., Fernandez M., Duque E., Segura A., Ramos J.L.
Microb. Biotechnol. 6:598-611(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DOT-T1E.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003734 Genomic DNA. Translation: AFO47694.1.
RefSeqYP_006532486.1. NC_018220.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFO47694; AFO47694; T1E_1846.
GeneID13344129.
KEGGppx:T1E_1846.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPPUT1196325:GLIV-1862-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI7C7K5_PSEPT
AccessionPrimary (citable) accession number: I7C7K5
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: December 11, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)