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I7BU69 (I7BU69_NATSJ) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP dependent DNA ligase EMBL AFO56410.1
Gene names
Ordered Locus Names:NJ7G_1163 EMBL AFO56410.1
OrganismNatrinema sp. (strain J7-2) [Complete proteome] [HAMAP] EMBL AFO56410.1
Taxonomic identifier406552 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Natrinema

Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFO56410.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I7BU69 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: 07EDFD0A95DB3F9C

FASTA37942,390
        10         20         30         40         50         60 
MDREDYLERL GATTDEPTDL FEHFEQRSVG GRTHHVLTAA RHGVERGTVI VEESDAVVRG 

        70         80         90        100        110        120 
YPSVPRVLVL DPGLPSFFEG TDSVAVEEKL DGFNVRIALA GGDGDAPLAF TRSGYVCPYT 

       130        140        150        160        170        180 
TARARDRLPL AAFFAEHPTK VLCTELIGPE TPYTSHDYED IDSHEFRVFD VRDRESGDPV 

       190        200        210        220        230        240 
PVADRRTLCA EYGIGQPRWF GRSEPSAAVE TVRDAIDELD AAGREGVVVK SADGKSMVKY 

       250        260        270        280        290        300 
TTETQHHAEL AYAFSLPFEH GRDFVFSRIV RDAFQAVESG DSDDRLRERA RDLGESILHP 

       310        320        330        340        350        360 
MVSTIRDVRD GDQVGERHTV RGDPDAIDAL FEHLDDQSLT IDRRSDRRED GTRVVEFVKV 

       370 
AESSRDRIQY YLDGGTRDE

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References

[1]"The Complete Genome Sequence of Natrinema sp. J7-2, a Haloarchaeon Capable of Growth on Synthetic Media without Amino Acid Supplements."
Feng J., Liu B., Zhang Z., Ren Y., Li Y., Gan F., Huang Y., Chen X., Shen P., Wang L., Tang B., Tang X.F.
PLoS ONE 7:E41621-E41621(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: J7-2 EMBL AFO56410.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003412 Genomic DNA. Translation: AFO56410.1.
RefSeqYP_006540486.1. NC_018224.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID13351655.
KEGGnat:NJ7G_1163.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07468.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI7BU69_NATSJ
AccessionPrimary (citable) accession number: I7BU69
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: March 6, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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