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I7A4C8 (I7A4C8_PSEST) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
ORF Names:PSJM300_16935 EMBL AFN79444.1, PSJM300_17000 EMBL AFN79457.1
OrganismPseudomonas stutzeri DSM 10701 [Complete proteome] EMBL AFN79444.1
Taxonomic identifier1123519 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length399 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding83 – 875GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding138 – 1414GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
I7A4C8 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: B7381132E9B89029

FASTA39943,572
        10         20         30         40         50         60 
MAKEKFERNK PHVNVGTIGH VDHGKTTLTA ALTRVCAEVF GSGGVSKGYD QIDNAPEEKA 

        70         80         90        100        110        120 
RGITINTSHV EYDSPIRHYA HVDCPGHADY VKNMITGAAQ MDGAILVCSA ADGPMPQTRE 

       130        140        150        160        170        180 
HILLSRQVGV PYIVVFLNKA DMVDDAELLE LVEMEVRDLL STYDFPGDDT PIIIGSALMA 

       190        200        210        220        230        240 
LNGEDENGLG TSAVKKLVET LDSYIPEPER AIDKPFLMPI EDVFSISGRG TVVTGRVERG 

       250        260        270        280        290        300 
IVRVQEEIEI VGIRDTTKTT CTGVEMFRKL LDEGRAGENV GVLLRGTKRD DVERGQVLAK 

       310        320        330        340        350        360 
PGTIKPHTKF EGEVYVLSKE EGGRHTPFFK GYRPQFYFRT TDVTGNCELP EGVEMVMPGD 

       370        380        390 
NIKMVVTLIA PIAMEDGLRF AIREGGRTVG AGVVAKIIE 

« Hide

References

[1]"Genome Sequence of Pseudomonas stutzeri Strain JM300 (DSM 10701), a Soil Isolate and Model Organism for Natural Transformation."
Busquets A., Pena A., Gomila M., Bosch R., Nogales B., Garcia-Valdes E., Lalucat J., Bennasar A.
J. Bacteriol. 194:5477-5478(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 10701 EMBL AFN79444.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003725 Genomic DNA. Translation: AFN79444.1.
CP003725 Genomic DNA. Translation: AFN79457.1.
RefSeqYP_006525802.1. NC_018177.1.
YP_006525815.1. NC_018177.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFN79444; AFN79444; PSJM300_16935.
AFN79457; AFN79457; PSJM300_17000.
GeneID13325983.
13325995.
KEGGpsj:PSJM300_16935.
psj:PSJM300_17000.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycPSTU1123519:GLIY-3422-MONOMER.
PSTU1123519:GLIY-3436-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI7A4C8_PSEST
AccessionPrimary (citable) accession number: I7A4C8
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: June 11, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)