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I6Y8F6 (I6Y8F6_MYCAB) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length405 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. RuleBase RU004247 SAAS SAAS009006 HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS009006 HAMAP-Rule MF_01201

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site531Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2911Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1511Substrate By similarity HAMAP-Rule MF_01201
Binding site3391Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue531N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
I6Y8F6 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: B8268AA68E52083D

FASTA40542,125
        10         20         30         40         50         60 
MGPVSTTSTT TDGLPPSTGA TAAQAVIDLG AIAHNVKLLR EHAGTARLMA VVKADGYGHG 

        70         80         90        100        110        120 
AVRVARAALA AGADELGVTS ITEALQIRAA GLDAPLLAWL HAPGADYAAA LHADVEVAVS 

       130        140        150        160        170        180 
SLGQLGELLA AARSTGRQAI TSIKVDTGLN RNGVPAGYTR DLFEALAKAQ AEESIRLRGI 

       190        200        210        220        230        240 
MSHFAYADQP GHPTIDMQIG RFNEALELAR GFGLRYELAH LSNSAATLTR PDARYDMVRP 

       250        260        270        280        290        300 
GIAVYGINPL GAAESATSNR GRTSFDLIPA MSLTCAVSSV KPVSAGEGVS YGHVWTAPRD 

       310        320        330        340        350        360 
TNAALIGIGY ADGVVRGLGN RFEVAIGGRR YPNIGRVCMD QFVVDLGDND AGVQAGDVAT 

       370        380        390        400 
LFGPGTAGEP TAQDWAELLD TIAYEVVTGP RGRVVRTYRD SRAVE 

« Hide

References

[1]"Complete Genome Sequence of Mycobacterium massiliense."
Raiol T., Ribeiro G.M., Maranhao A.Q., Bocca A.L., Silva-Pereira I., Junqueira-Kipnis A.P., Brigido Mde M., Kipnis A.
J. Bacteriol. 194:5455-5455(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: GO 06 EMBL AFN64186.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003699 Genomic DNA. Translation: AFN64186.1.
RefSeqYP_006521793.1. NC_018150.1.

3D structure databases

ProteinModelPortalI6Y8F6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFN64186; AFN64186; MYCMA_2054.
GeneID13324526.
KEGGmmv:MYCMA_2054.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycMMAS1198627:GLGQ-2051-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI6Y8F6_MYCAB
AccessionPrimary (citable) accession number: I6Y8F6
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: February 19, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)