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I6Y496 (I6Y496_MYCTU) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length224 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Contains HTH crp-type DNA-binding domain. SAAS SAAS000595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding79 – 824cAMP PDB 4A2U
Nucleotide binding89 – 913cAMP PDB 4A2U
Nucleotide binding134 – 1352cAMP PDB 4A2U

Sequences

Sequence LengthMass (Da)Tools
I6Y496 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: BAB89A61B64839E3

FASTA22424,791
        10         20         30         40         50         60 
MDEILARAGI FQGVEPSAIA ALTKQLQPVD FPRGHTVFAE GEPGDRLYII ISGKVKIGRR 

        70         80         90        100        110        120 
APDGRENLLT IMGPSDMFGE LSIFDPGPRT SSATTITEVR AVSMDRDALR SWIADRPEIS 

       130        140        150        160        170        180 
EQLLRVLARR LRRTNNNLAD LIFTDVPGRV AKQLLQLAQR FGTQEGGALR VTHDLTQEEI 

       190        200        210        220 
AQLVGASRET VNKALADFAH RGWIRLEGKS VLISDSERLA RRAR 

« Hide

References

« Hide 'large scale' references
[1]"A New Crystal Form of Crp from M. Tuberculosis and Conformational Effects of Crystal Packing."
Kim S.-K., Robinson H., Reddy P.T., Gallagher D.T.
Submitted (SEP-2011) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.63 ANGSTROMS) IN COMPLEX WITH CAMP.
[2]"The genome sequence of Mycobacterium tuberculosis H37Rv."
The Broad Institute Genome Sequencing Platform
Galagan J., Kreiswirth B., Dobos K., Fortune S., Fitzgerald M., Young S.K., Zeng Q., Gargeya S., Abouelleil A., Alvarado L., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J., Gnerre S., Griggs A., Gujja S., Hansen M. expand/collapse author list , Howarth C., Imamovic A., Larimer J., McCowan C., Murphy C., Pearson M., Poon T., Priest M., Roberts A., Saif S., Shea T., Sykes S., Wortman J., Nusbaum C., Birren B.
Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25618 / H37Rv.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003248 Genomic DNA. Translation: AFN51693.1.
RefSeqNP_218193.1. NC_000962.3.
YP_006517164.1. NC_018143.2.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4A2UX-ray2.63A/B/C/D/E/F/G/H1-224[»]
ProteinModelPortalI6Y496.
SMRI6Y496. Positions 1-224.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFN51693; AFN51693; RVBD_3676.
GeneID13317285.
885502.
KEGGmtu:Rv3676.
mtv:RVBD_3676.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAFLMVLCR.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProIPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP_2.
IPR014710. RmlC-like_jellyroll.
IPR001808. Tscrpt_reg_HTH_Crp.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00027. cNMP_binding. 1 hit.
[Graphical view]
SMARTSM00100. cNMP. 1 hit.
SM00419. HTH_CRP. 1 hit.
[Graphical view]
SUPFAMSSF51206. SSF51206. 1 hit.
PROSITEPS50042. CNMP_BINDING_3. 1 hit.
PS51063. HTH_CRP_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI6Y496_MYCTU
AccessionPrimary (citable) accession number: I6Y496
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)