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I6TV39

- I6TV39_9EURY

UniProt

I6TV39 - I6TV39_9EURY

Protein
Submitted name:

ATP dependent DNA ligase

Gene

PFC_01005

Organism
Pyrococcus furiosus COM1
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (03 Oct 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPFUR1185654:GLJ1-205-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    ORF Names:PFC_01005Imported
    OrganismiPyrococcus furiosus COM1Imported
    Taxonomic identifieri1185654 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
    ProteomesiUP000006216: Chromosome

    PTM / Processingi

    Proteomic databases

    PRIDEiI6TV39.

    Structurei

    3D structure databases

    ProteinModelPortaliI6TV39.
    SMRiI6TV39. Positions 7-379.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK07468.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    PRINTSiPR01048. Y414FAMILY.
    TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I6TV39-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVSSKFKELL YTLGIPEDKV EILEARGGIM EDEFEGIRYL RFKNSVGKLR    50
    RGTVLFEDGT TVFGFPHIKR IVNLSAGVRK IFKSSEFYVE EKVDGYNVRV 100
    VKFKDRILGI TRGGFICPYT TERIAEFVPE EFFKDHKDLV LVGEMAGPES 150
    PYLVEGPPYV KEDIQFFLFD IQDIKTGSSL PVEERLKLAE EYGINHVEVF 200
    GRYSYKDIDD LYELIERLSR EGREGIVMKS PDMKKIVKYV TPYANINDIK 250
    IGARVFYELP GGYFTSRISR LAFYIAEKKI RGEELHNLAL QLGKALLQPL 300
    VEAIHDVTQG DVIAERFRVR VRKIETAYKM VTHFEKLGLE IEIEDIEEIE 350
    GGWRVTFKRV YPEATREIRD LIGGKAFVD 379
    Length:379
    Mass (Da):43,712
    Last modified:October 3, 2012 - v1
    Checksum:iEECF32BCF4758CC2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003685 Genomic DNA. Translation: AFN03174.1.
    RefSeqiWP_014835129.1. NC_018092.1.
    YP_006491466.1. NC_018092.1.

    Genome annotation databases

    EnsemblBacteriaiAFN03174; AFN03174; PFC_01005.
    GeneIDi13302189.
    KEGGipfi:PFC_01005.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003685 Genomic DNA. Translation: AFN03174.1 .
    RefSeqi WP_014835129.1. NC_018092.1.
    YP_006491466.1. NC_018092.1.

    3D structure databases

    ProteinModelPortali I6TV39.
    SMRi I6TV39. Positions 7-379.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi I6TV39.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFN03174 ; AFN03174 ; PFC_01005 .
    GeneIDi 13302189.
    KEGGi pfi:PFC_01005.

    Phylogenomic databases

    KOi K07468.

    Enzyme and pathway databases

    BioCyci PFUR1185654:GLJ1-205-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    PRINTSi PR01048. Y414FAMILY.
    TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome Sequencing of a Genetically-Tractable Pyrococcus furiosus Strain Reveals a Highly Dynamic Genome."
      Bridger S.L., Lancaster W.A., Poole F.L.II., Schut G.J., Adams M.W.
      J. Bacteriol. 194:4097-4106(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: COM1Imported.

    Entry informationi

    Entry nameiI6TV39_9EURY
    AccessioniPrimary (citable) accession number: I6TV39
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2012
    Last sequence update: October 3, 2012
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3