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I6TV39 (I6TV39_9EURY) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP dependent DNA ligase EMBL AFN03174.1
Gene names
ORF Names:PFC_01005 EMBL AFN03174.1
OrganismPyrococcus furiosus COM1 EMBL AFN03174.1
Taxonomic identifier1185654 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus ›

Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFN03174.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I6TV39 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: EECF32BCF4758CC2

FASTA37943,712
        10         20         30         40         50         60 
MVSSKFKELL YTLGIPEDKV EILEARGGIM EDEFEGIRYL RFKNSVGKLR RGTVLFEDGT 

        70         80         90        100        110        120 
TVFGFPHIKR IVNLSAGVRK IFKSSEFYVE EKVDGYNVRV VKFKDRILGI TRGGFICPYT 

       130        140        150        160        170        180 
TERIAEFVPE EFFKDHKDLV LVGEMAGPES PYLVEGPPYV KEDIQFFLFD IQDIKTGSSL 

       190        200        210        220        230        240 
PVEERLKLAE EYGINHVEVF GRYSYKDIDD LYELIERLSR EGREGIVMKS PDMKKIVKYV 

       250        260        270        280        290        300 
TPYANINDIK IGARVFYELP GGYFTSRISR LAFYIAEKKI RGEELHNLAL QLGKALLQPL 

       310        320        330        340        350        360 
VEAIHDVTQG DVIAERFRVR VRKIETAYKM VTHFEKLGLE IEIEDIEEIE GGWRVTFKRV 

       370 
YPEATREIRD LIGGKAFVD

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References

[1]"Genome Sequencing of a Genetically Tractable Pyrococcus furiosus Strain Reveals a Highly Dynamic Genome."
Bridger S.L., Lancaster W.A., Poole F.L.II., Schut G.J., Adams M.W.
J. Bacteriol. 194:4097-4106(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: COM1 EMBL AFN03174.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003685 Genomic DNA. Translation: AFN03174.1.
RefSeqYP_006491466.1. NC_018092.1.

3D structure databases

ProteinModelPortalI6TV39.
SMRI6TV39. Positions 7-379.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFN03174; AFN03174; PFC_01005.
GeneID13302189.
KEGGpfi:PFC_01005.

Phylogenomic databases

KOK07468.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI6TV39_9EURY
AccessionPrimary (citable) accession number: I6TV39
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: May 1, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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