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I6TV39

- I6TV39_9EURY

UniProt

I6TV39 - I6TV39_9EURY

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

PFC_01005

Organism
Pyrococcus furiosus COM1
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPFUR1185654:GLJ1-205-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
ORF Names:PFC_01005Imported
OrganismiPyrococcus furiosus COM1Imported
Taxonomic identifieri1185654 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
ProteomesiUP000006216: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiI6TV39.

Structurei

3D structure databases

ProteinModelPortaliI6TV39.
SMRiI6TV39. Positions 7-379.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK07468.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

I6TV39-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MVSSKFKELL YTLGIPEDKV EILEARGGIM EDEFEGIRYL RFKNSVGKLR
60 70 80 90 100
RGTVLFEDGT TVFGFPHIKR IVNLSAGVRK IFKSSEFYVE EKVDGYNVRV
110 120 130 140 150
VKFKDRILGI TRGGFICPYT TERIAEFVPE EFFKDHKDLV LVGEMAGPES
160 170 180 190 200
PYLVEGPPYV KEDIQFFLFD IQDIKTGSSL PVEERLKLAE EYGINHVEVF
210 220 230 240 250
GRYSYKDIDD LYELIERLSR EGREGIVMKS PDMKKIVKYV TPYANINDIK
260 270 280 290 300
IGARVFYELP GGYFTSRISR LAFYIAEKKI RGEELHNLAL QLGKALLQPL
310 320 330 340 350
VEAIHDVTQG DVIAERFRVR VRKIETAYKM VTHFEKLGLE IEIEDIEEIE
360 370
GGWRVTFKRV YPEATREIRD LIGGKAFVD
Length:379
Mass (Da):43,712
Last modified:October 3, 2012 - v1
Checksum:iEECF32BCF4758CC2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003685 Genomic DNA. Translation: AFN03174.1.
RefSeqiWP_014835129.1. NC_018092.1.
YP_006491466.1. NC_018092.1.

Genome annotation databases

EnsemblBacteriaiAFN03174; AFN03174; PFC_01005.
GeneIDi13302189.
KEGGipfi:PFC_01005.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003685 Genomic DNA. Translation: AFN03174.1 .
RefSeqi WP_014835129.1. NC_018092.1.
YP_006491466.1. NC_018092.1.

3D structure databases

ProteinModelPortali I6TV39.
SMRi I6TV39. Positions 7-379.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi I6TV39.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFN03174 ; AFN03174 ; PFC_01005 .
GeneIDi 13302189.
KEGGi pfi:PFC_01005.

Phylogenomic databases

KOi K07468.

Enzyme and pathway databases

BioCyci PFUR1185654:GLJ1-205-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
PRINTSi PR01048. Y414FAMILY.
TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome Sequencing of a Genetically-Tractable Pyrococcus furiosus Strain Reveals a Highly Dynamic Genome."
    Bridger S.L., Lancaster W.A., Poole F.L.II., Schut G.J., Adams M.W.
    J. Bacteriol. 194:4097-4106(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: COM1Imported.

Entry informationi

Entry nameiI6TV39_9EURY
AccessioniPrimary (citable) accession number: I6TV39
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: October 1, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3