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I6TKJ3 (I6TKJ3_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:HLA-B EMBL AFM74034.1
OrganismHomo sapiens (Human) EMBL AFM74034.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length273 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the MHC class I family. RuleBase RU004439

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS027648

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AFM74034.1
Non-terminal residue2731 EMBL AFM74034.1

Sequences

Sequence LengthMass (Da)Tools
I6TKJ3 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: 401C74A994732D6F

FASTA27331,771
        10         20         30         40         50         60 
SHSMRYFHTA MSRPGRGEPR FITVGYVDDT LFVRFDSDAT SPRKEPRAPW IEQEGPEYWD 

        70         80         90        100        110        120 
RETQISKTNT QTYRESLRNL RGYYNQSEAG SHTWQRMYGC DLGPDGRLLR GYNQLAYDGK 

       130        140        150        160        170        180 
DYIALNQDLS SWTAADTAAQ ITQRKWEAAR EAEQLRAYLE GLCVEWLRRY LENGKETLQR 

       190        200        210        220        230        240 
ADPPKTHVTH HPISDHEATL RCWALGFYPA EITLTWQRDG EDQTQDTELV ETRPAGDRTF 

       250        260        270 
QKWAAVVVPS GEEQRYTCHV QHEGLPKPLT LRW 

« Hide

References

[1]"Identification of the novel HLA-B*50:18 allele variant in an Italian unrelated bone marrow donor."
Azzarone R., Canossi A., Cervelli C., Scimitarra M., Papola F.
Tissue Antigens 81:466-468(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Blood EMBL AFM74034.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
JQ952567 Genomic DNA. Translation: AFM74034.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.30.500.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011161. MHC_I-like_Ag-recog.
IPR011162. MHC_I/II-like_Ag-recog.
IPR027648. MHC_I_a.
IPR001039. MHC_I_a_a1/a2.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00129. MHC_I. 1 hit.
[Graphical view]
PRINTSPR01638. MHCCLASSI.
SMARTSM00407. IGc1. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSHLA-B. human.
NextBio35534365.

Entry information

Entry nameI6TKJ3_HUMAN
AccessionPrimary (citable) accession number: I6TKJ3
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: October 16, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.