Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

I6S4P2 (I6S4P2_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:HLA-A EMBL AFM56240.1
OrganismHomo sapiens (Human) EMBL AFM56240.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length273 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the MHC class I family. RuleBase RU004439

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS027648

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AFM56240.1
Non-terminal residue2731 EMBL AFM56240.1

Sequences

Sequence LengthMass (Da)Tools
I6S4P2 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: 42E27D8893186E7C

FASTA27331,446
        10         20         30         40         50         60 
SHSMRYFTTS VSRPGRGEPR FIAVGYVDDT QFVRFDSDAA SQRMEPRAPW IEQEGPEYWD 

        70         80         90        100        110        120 
LQTRNVKAQS QTDRANLGTL RGYYNQSEAG SHTIQMMFGC HVGSDGRFLR GYRQDAYDGK 

       130        140        150        160        170        180 
DYIALNEDLR SWTAADMAAQ ITQRKWEAAR VAEQLRAYLE GTCVEWLRRY LENGKETLQR 

       190        200        210        220        230        240 
TDAPKTHMTH HAVSDHEATL RCWALSFYPA EITLTWQRDG EDQTQDTELV ETRPAGDGTF 

       250        260        270 
QKWASVVVPS GQEQRYTCHV QHEGLPKPLT LRW 

« Hide

References

[1]"Identification of a novel HLA-A*29 allele by sequence-based typing."
Zhu C., Nie X., Zhang Y., Song Y., Zhuang Y., Liu Y., Qiao W.
Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
JQ913141 Genomic DNA. Translation: AFM56240.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.30.500.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011161. MHC_I-like_Ag-recog.
IPR011162. MHC_I/II-like_Ag-recog.
IPR027648. MHC_I_a.
IPR001039. MHC_I_a_a1/a2.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00129. MHC_I. 1 hit.
[Graphical view]
PRINTSPR01638. MHCCLASSI.
SMARTSM00407. IGc1. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSHLA-A. human.
NextBio35534324.

Entry information

Entry nameI6S4P2_HUMAN
AccessionPrimary (citable) accession number: I6S4P2
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: October 16, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.