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I6RZ93 (I6RZ93_PSEAI) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:PADK2_14905 EMBL AFM65260.1
OrganismPseudomonas aeruginosa DK2 [Complete proteome] EMBL AFM65260.1
Taxonomic identifier1093787 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length1100 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
I6RZ93 [UniParc].

Last modified October 3, 2012. Version 1.
Checksum: FD24B687B6F04544

FASTA1,100124,508
        10         20         30         40         50         60 
MARREKPVFL NDPQWYKDAV IYQVHVKSFY DANNDGIGDF AGLIEKLDYI ADLGVNTLWL 

        70         80         90        100        110        120 
LPFYPSPRRD DGYDIAQYRG VHSDYGSLAD ARRFIAEAHR RGLRVITELV INHTSDQHPW 

       130        140        150        160        170        180 
FIRARHAKKG SRARDYYVWS DSDEKYQGTR IIFIDTEQSN WTWDPVAQQY YWHRFYSHQP 

       190        200        210        220        230        240 
DLNFDNPQVL REVLGVMRYW LDMGVDGLRL DAIPYLIERD GTSSENLPET HQVLKRIRAE 

       250        260        270        280        290        300 
LDAHYPDRML LAEANQWPED TRPYFGGEDG GEGDECHMAF HFPLMPRMYM AIAQEDRYPI 

       310        320        330        340        350        360 
TDILRQTPDI PANCQWAIFL RNHDELTLEM VTDDERDYLW NHYAADRRAR LNLGIRRRLA 

       370        380        390        400        410        420 
PLVERDRRRI ELLHSLLLSM PGTPTLYYGD EIGMGDNIYL GDRDGVRTPM QWSVDRNGGF 

       430        440        450        460        470        480 
SRADPAKLVL PPVLDPLYGY QTINVEAQAR DPHSLLNWMR RLLAVRSQQK AFGRGSLKML 

       490        500        510        520        530        540 
APSNRRILAY LREYAEGERQ DSILCVANLS RAAQAVELDL ASHAGKVPVE MIGGMSFPPI 

       550        560        570        580        590        600 
GELTYLLTLP PYGFYWFYLA DATQMPSWHV AADERLPELP TLVVKQRLGE LLQGASRNIL 

       610        620        630        640        650        660 
EGETLPAYLP KRRWFAGEKG QPRLCYIVPL DEAEPRCALC EVEIDGLRYQ LPLGFLDADQ 

       670        680        690        700        710        720 
RGDSLPQLLA LARLRRGRKV GLLTDAASLP LFARKVLAQL RAEAVIAHGD GEIQFIPAAG 

       730        740        750        760        770        780 
LAEMDDIADE DVLPFSVEQS NSSIRFGERM VLKVLRKILP GLHPEIEVGG YLTRHGYPGI 

       790        800        810        820        830        840 
APLLGEVRRV GADGEPHTLM ILQGYLNNQG DAWNWTLDNL ERAVRDEISA ASEALEGQYD 

       850        860        870        880        890        900 
SLAELRGFAA NLGARLGEMH SVLAGESDDP AFGSRESDEA SVQAWALRIA EQLREAGKRL 

       910        920        930        940        950        960 
SEPPRPLQGE AAEQARRLLE RLPALLERLP LLARQAAGGL LIRVHGDLHL GQVLMVQGDA 

       970        980        990       1000       1010       1020 
RFIDFEGEPA RSLEERRQRH SPMKDVGGML RSFDYAAAMV LRNAQSTDSS EQADSARRKV 

      1030       1040       1050       1060       1070       1080 
AMRYRSEARD AFLAGYRAAA AGLMHAWHGR EGEGAALALA CLEKAAYELL YEADYRPDWL 

      1090       1100 
EVPLAGLAEL TEHLLKGKNR 

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References

[1]"Deletion and acquisition of genomic content during early stage adaptation of Pseudomonas aeruginosa to a human host environment."
Rau M.H., Marvig R.L., Ehrlich G.D., Molin S., Jelsbak L.
Environ. Microbiol. 14:2200-2211(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DK2 EMBL AFM65260.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003149 Genomic DNA. Translation: AFM65260.1.
RefSeqYP_006482962.1. NC_018080.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFM65260; AFM65260; PADK2_14905.
GeneID13175816.
KEGGpdk:PADK2_14905.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Enzyme and pathway databases

BioCycPAER1093787:GLIP-2999-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI6RZ93_PSEAI
AccessionPrimary (citable) accession number: I6RZ93
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: January 22, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)