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I6RL71

- I6RL71_MYCTX

UniProt

I6RL71 - I6RL71_MYCTX

Protein
Submitted name:

ATP-dependent DNA ligase ligC

Gene

TBXG_003746

Organism
Mycobacterium tuberculosis KZN 605
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (03 Oct 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMTUB478435:GLGX-3871-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase ligCImported
    Gene namesi
    ORF Names:TBXG_003746Imported
    OrganismiMycobacterium tuberculosis KZN 605Imported
    Taxonomic identifieri478435 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
    ProteomesiUP000002898: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliI6RL71.
    SMRiI6RL71. Positions 6-340.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I6RL71-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQLPVMPPVS PMLAKSVTAI PPDASYEPKW DGFRSICFRD GDQVELGSRN    50
    ERPMTRYFPE LVAAIRAELP HRCVIDGEII IATDHGLDFE ALQQRIHPAE 100
    SRVRMLADRT PASFIAFDLL ALGDDDYTGR PFSERRAALV DAVTGSGADA 150
    DLSIHVTPAT TDMATAQRWF SEFEGAGLDG VIAKPPHITY QPDKRVMFKI 200
    KHLRTADCVV AGYRVHKSGS DAIGSLLLGL YQEDGQLASV GVIGAFPMAE 250
    RRRLLTELQP LVTSFDDHPW NWAAHVAGQR TPRKNEFSRW NVGKDLSFVP 300
    LRPERVVEVR YDHMEGARFR HTAQFNRWRP DRDPRSCSYA QLERPLTVSL 350
    SDIVPGLR 358
    Length:358
    Mass (Da):40,141
    Last modified:October 3, 2012 - v1
    Checksum:i22DA33D1A56196BD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001976 Genomic DNA. Translation: AFM51181.1.
    RefSeqiYP_006475258.1. NC_018078.1.

    Genome annotation databases

    EnsemblBacteriaiAFM51181; AFM51181; TBXG_003746.
    GeneIDi13159628.
    KEGGimtz:TBXG_003746.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001976 Genomic DNA. Translation: AFM51181.1 .
    RefSeqi YP_006475258.1. NC_018078.1.

    3D structure databases

    ProteinModelPortali I6RL71.
    SMRi I6RL71. Positions 6-340.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFM51181 ; AFM51181 ; TBXG_003746 .
    GeneIDi 13159628.
    KEGGi mtz:TBXG_003746.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci MTUB478435:GLGX-3871-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Genome Sequence of Mycobacterium tuberculosis strain KZN 605."
      The Broad Institute Genome Sequencing Platform, The Broad Institute Genome Sequencing Center for Infectious Disease.
      Galagan J., Murray M., Pillay M., Borowsky M.L., Young S.K., Zeng Q., Koehrsen M., Fitzgerald M., Abouelleil A., Alvarado L., Arachchi H.M., Berlin A.M., Borenstein D., Brown A., Chapman S.B., Chen Z., Dunbar C., Engels R.
      , Freedman E., Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E.R., Heiman D.I., Howarth C., Jen D., Larson L., Lui A., MacDonald J.P., Mehta T., Montmayeur A., Neiman D., Park D., Pearson M., Priest M., Richards J., Roberts A., Saif S., Shea T.D., Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., Yandava C., Haas B., Nusbaum C., Birren B.
      Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: KZN 605Imported.

    Entry informationi

    Entry nameiI6RL71_MYCTX
    AccessioniPrimary (citable) accession number: I6RL71
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2012
    Last sequence update: October 3, 2012
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3