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Protein
Submitted name:

Response regulator

Gene

tdiR

Organism
Azoarcus sp. CIB
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi163 – 182H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Response regulatorImported
Submitted name:
TdiRImported
Gene namesi
Name:tdiRImported
ORF Names:AzCIB_4501Imported
OrganismiAzoarcus sp. CIBImported
Taxonomic identifieri198107 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesZoogloeaceaeAzoarcus
Proteomesi
  • UP000066621 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei584-aspartylphosphatePROSITE-ProRule annotation1

Structurei

3D structure databases

ProteinModelPortaliI6LHT4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 123Response regulatoryInterPro annotationAdd BLAST115
Domaini139 – 204HTH luxR-typeInterPro annotationAdd BLAST66

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
cd00156. REC. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR011006. CheY-like_superfamily.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR036388. WH-like_DNA-bd_sf.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiView protein in PROSITE
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.

Sequencei

Sequence statusi: Complete.

I6LHT4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVENLSPTV FVVDDEESVR HSLSWLLGSI ALDVKMYDSP QAFLDADISG
60 70 80 90 100
SYGCLILDVR MQALSGLQLQ EILCQRGFNL PIIFLSAYGD AQMGAQAIKK
110 120 130 140 150
GAIDFLQKPY RNQDLLDAVN AALTQSKEAI GKQSERDKYR DCLESLSLRE
160 170 180 190 200
KEIFDLVVDG NSSKEIARLL GISPKTVEAH RGRLMSKLGV RSLGELIQLS
210
MLTKSHCLEC KWASRPAR
Length:218
Mass (Da):24,220
Last modified:October 3, 2012 - v1
Checksum:iBA29CDAECF587057
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ988527 Genomic DNA. Translation: ABK15650.1.
CP011072 Genomic DNA. Translation: AKU14388.1.
RefSeqiWP_050417931.1. NZ_CP011072.1.

Genome annotation databases

EnsemblBacteriaiAKU14388; AKU14388; AzCIB_4501.
KEGGiazi:AzCIB_4501.
PATRICifig|198107.6.peg.4655.

Similar proteinsi

Entry informationi

Entry nameiI6LHT4_9RHOO
AccessioniPrimary (citable) accession number: I6LHT4
Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: October 25, 2017
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported