Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

I4WVR6 (I4WVR6_9GAMM) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595

Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595
Gene names
Name:ppc HAMAP-Rule MF_00595
ORF Names:R2APBS1_3293 EMBL AGG90360.1, UUC_05702 EMBL EIM03558.1
OrganismRhodanobacter denitrificans [Complete proteome] EMBL EIM03558.1
Taxonomic identifier666685 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeRhodanobacter

Protein attributes

Sequence length900 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 SAAS SAAS021135

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS018129

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS018129

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1491 By similarity HAMAP-Rule MF_00595
Active site5671 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
I4WVR6 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: B301E340C210EE27

FASTA90099,526
        10         20         30         40         50         60 
MEPSREPEFL PPDGPLREDV SRLGAMVGRM LAEQGGDTFF ARVEQVRTAA IRRRREGASV 

        70         80         90        100        110        120 
EELAASLAGL DADDAEALAR AFATYFQAVN TAERVHRIRR RRDYQREGSA PQPESLLDVL 

       130        140        150        160        170        180 
GRLKAAGVGA DELVGWLDRL WIEPVFTAHP TEAVRRSLLE KEQAIVASLI DGFDRERTPQ 

       190        200        210        220        230        240 
ERREDDDRIY MALSAGWQTA EASPVRPSVQ DEREHVDFYL AHPLYRIVPA LYESLAQALQ 

       250        260        270        280        290        300 
TTYGVAIKLP RLLRFASWVG GDMDGNPNVG ADTIADCLDS QRALVLERYR EDVATLARLL 

       310        320        330        340        350        360 
SQTEGRVAAS AALRARLADY RARFPAAAAQ IRPRHADMPY RCLLQLVGAR LALTGDESSD 

       370        380        390        400        410        420 
GYPSSGELLD DLQLIADSLF QHRGVHAGAY AVERLLCRVR SFGFHLARLD VRQDSRVHDD 

       430        440        450        460        470        480 
ALAALLADDG WAARQADERA RQLRDYASGG ARFAISHAEV VVALYDVFAT LGNTRRRYGG 

       490        500        510        520        530        540 
EAVGLYIISM ARSAADVLAV LALARYGGLV QDDNVPLNIA PLFETVDDLK NAPATLRALL 

       550        560        570        580        590        600 
DDPVYRRHLA ARGDQQWVML GYSDSGKDGG TLASRWGLQR AQVELLEVAH AASIQLAFFH 

       610        620        630        640        650        660 
GRGGSASRGG ARITPALMSS PRGAVAGVLR VTEQGEVIHR KYGIRALALR NLEQTVGAVL 

       670        680        690        700        710        720 
RASLRPRVDE PREARWREQM DALAAASRKT YRAFVERDGF VDYFRTATPV DVIERMTLGS 

       730        740        750        760        770        780 
RPASRRSMRG VQDLRAIPWV FAWTQCRSIL PGWYGLGSAL EQGVQQFGEA ALAEMARDWP 

       790        800        810        820        830        840 
FFANLLDDVE MVLAKCDLDI AEAFSKLSGA LHEEFFGLIR DEFARTRHWL LRLKGSDALL 

       850        860        870        880        890        900 
QGDPRLAASI RLRNPYVDPM SLLQVDLLQR WRAGEHTDDA VLQALVACVN GVSQGLQNTG 

« Hide

References

[1]"Genome sequences for six rhodanobacter strains, isolated from soils and the terrestrial subsurface, with variable denitrification capabilities."
Kostka J.E., Green S.J., Rishishwar L., Prakash O., Katz L.S., Marino-Ramirez L., Jordan I.K., Munk C., Ivanova N., Mikhailova N., Watson D.B., Brown S.D., Palumbo A.V., Brooks S.C.
J. Bacteriol. 194:4461-4462(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 116-2 EMBL EIM03558.1.
[2]"Complete genome of Rhodanobacter sp. 2APBS1."
US DOE Joint Genome Institute
Huntemann M., Wei C.-L., Han J., Detter J.C., Han C., Tapia R., Munk A.C.C., Chen A., Krypides N., Mavromatis K., Markowitz V., Szeto E., Ivanova N., Mikhailova N., Ovchinnikova G., Pagani I., Pati A., Goodwin L. expand/collapse author list , Peters L., Pitluck S., Woyke T., Prakash O., Elkins J., Brown S., Palumbo A., Hemme C., Zhou J., Watson D., Jardine P., Kostka J., Green S.
Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 2APBS1 EMBL AGG90360.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003470 Genomic DNA. Translation: AGG90360.1.
AJXV01000015 Genomic DNA. Translation: EIM03558.1.
RefSeqYP_007591595.1. NC_020541.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGG90360; AGG90360; R2APBS1_3293.
EIM03558; EIM03558; UUC_05702.
GeneID14750653.
KEGGrhd:R2APBS1_3293.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01595.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI4WVR6_9GAMM
AccessionPrimary (citable) accession number: I4WVR6
Secondary accession number(s): M4NHC5
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: June 11, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)