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I4WVR6

- I4WVR6_9GAMM

UniProt

I4WVR6 - I4WVR6_9GAMM

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Protein

Phosphoenolpyruvate carboxylase

Gene
ppc, R2APBS1_3293, UUC_05702
Organism
Rhodanobacter denitrificans
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotationSAAS annotations

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei149 – 1491 By similarityUniRule annotation
Active sitei567 – 5671 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
ORF Names:R2APBS1_3293Imported, UUC_05702Imported
OrganismiRhodanobacter denitrificansImported
Taxonomic identifieri666685 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeRhodanobacter
ProteomesiUP000011859: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I4WVR6-1 [UniParc]FASTAAdd to Basket

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MEPSREPEFL PPDGPLREDV SRLGAMVGRM LAEQGGDTFF ARVEQVRTAA    50
IRRRREGASV EELAASLAGL DADDAEALAR AFATYFQAVN TAERVHRIRR 100
RRDYQREGSA PQPESLLDVL GRLKAAGVGA DELVGWLDRL WIEPVFTAHP 150
TEAVRRSLLE KEQAIVASLI DGFDRERTPQ ERREDDDRIY MALSAGWQTA 200
EASPVRPSVQ DEREHVDFYL AHPLYRIVPA LYESLAQALQ TTYGVAIKLP 250
RLLRFASWVG GDMDGNPNVG ADTIADCLDS QRALVLERYR EDVATLARLL 300
SQTEGRVAAS AALRARLADY RARFPAAAAQ IRPRHADMPY RCLLQLVGAR 350
LALTGDESSD GYPSSGELLD DLQLIADSLF QHRGVHAGAY AVERLLCRVR 400
SFGFHLARLD VRQDSRVHDD ALAALLADDG WAARQADERA RQLRDYASGG 450
ARFAISHAEV VVALYDVFAT LGNTRRRYGG EAVGLYIISM ARSAADVLAV 500
LALARYGGLV QDDNVPLNIA PLFETVDDLK NAPATLRALL DDPVYRRHLA 550
ARGDQQWVML GYSDSGKDGG TLASRWGLQR AQVELLEVAH AASIQLAFFH 600
GRGGSASRGG ARITPALMSS PRGAVAGVLR VTEQGEVIHR KYGIRALALR 650
NLEQTVGAVL RASLRPRVDE PREARWREQM DALAAASRKT YRAFVERDGF 700
VDYFRTATPV DVIERMTLGS RPASRRSMRG VQDLRAIPWV FAWTQCRSIL 750
PGWYGLGSAL EQGVQQFGEA ALAEMARDWP FFANLLDDVE MVLAKCDLDI 800
AEAFSKLSGA LHEEFFGLIR DEFARTRHWL LRLKGSDALL QGDPRLAASI 850
RLRNPYVDPM SLLQVDLLQR WRAGEHTDDA VLQALVACVN GVSQGLQNTG 900
Length:900
Mass (Da):99,526
Last modified:September 5, 2012 - v1
Checksum:iB301E340C210EE27
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003470 Genomic DNA. Translation: AGG90360.1.
AJXV01000015 Genomic DNA. Translation: EIM03558.1.
RefSeqiWP_007509388.1. NZ_AJXV01000015.1.
YP_007591595.1. NC_020541.1.

Genome annotation databases

EnsemblBacteriaiAGG90360; AGG90360; R2APBS1_3293.
EIM03558; EIM03558; UUC_05702.
GeneIDi14750653.
KEGGirhd:R2APBS1_3293.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003470 Genomic DNA. Translation: AGG90360.1 .
AJXV01000015 Genomic DNA. Translation: EIM03558.1 .
RefSeqi WP_007509388.1. NZ_AJXV01000015.1.
YP_007591595.1. NC_020541.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGG90360 ; AGG90360 ; R2APBS1_3293 .
EIM03558 ; EIM03558 ; UUC_05702 .
GeneIDi 14750653.
KEGGi rhd:R2APBS1_3293.

Phylogenomic databases

KOi K01595.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequences for six rhodanobacter strains, isolated from soils and the terrestrial subsurface, with variable denitrification capabilities."
    Kostka J.E., Green S.J., Rishishwar L., Prakash O., Katz L.S., Marino-Ramirez L., Jordan I.K., Munk C., Ivanova N., Mikhailova N., Watson D.B., Brown S.D., Palumbo A.V., Brooks S.C.
    J. Bacteriol. 194:4461-4462(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 116-2Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 2APBS1Imported.

Entry informationi

Entry nameiI4WVR6_9GAMM
AccessioniPrimary (citable) accession number: I4WVR6
Secondary accession number(s): M4NHC5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: September 3, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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