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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Rhodanobacter denitrificans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei149 – 1491UniRule annotation
Active sitei567 – 5671UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
ORF Names:R2APBS1_3293Imported
OrganismiRhodanobacter denitrificansImported
Taxonomic identifieri666685 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeRhodanobacter
ProteomesiUP000011859 Componenti: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I4WVR6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEPSREPEFL PPDGPLREDV SRLGAMVGRM LAEQGGDTFF ARVEQVRTAA
60 70 80 90 100
IRRRREGASV EELAASLAGL DADDAEALAR AFATYFQAVN TAERVHRIRR
110 120 130 140 150
RRDYQREGSA PQPESLLDVL GRLKAAGVGA DELVGWLDRL WIEPVFTAHP
160 170 180 190 200
TEAVRRSLLE KEQAIVASLI DGFDRERTPQ ERREDDDRIY MALSAGWQTA
210 220 230 240 250
EASPVRPSVQ DEREHVDFYL AHPLYRIVPA LYESLAQALQ TTYGVAIKLP
260 270 280 290 300
RLLRFASWVG GDMDGNPNVG ADTIADCLDS QRALVLERYR EDVATLARLL
310 320 330 340 350
SQTEGRVAAS AALRARLADY RARFPAAAAQ IRPRHADMPY RCLLQLVGAR
360 370 380 390 400
LALTGDESSD GYPSSGELLD DLQLIADSLF QHRGVHAGAY AVERLLCRVR
410 420 430 440 450
SFGFHLARLD VRQDSRVHDD ALAALLADDG WAARQADERA RQLRDYASGG
460 470 480 490 500
ARFAISHAEV VVALYDVFAT LGNTRRRYGG EAVGLYIISM ARSAADVLAV
510 520 530 540 550
LALARYGGLV QDDNVPLNIA PLFETVDDLK NAPATLRALL DDPVYRRHLA
560 570 580 590 600
ARGDQQWVML GYSDSGKDGG TLASRWGLQR AQVELLEVAH AASIQLAFFH
610 620 630 640 650
GRGGSASRGG ARITPALMSS PRGAVAGVLR VTEQGEVIHR KYGIRALALR
660 670 680 690 700
NLEQTVGAVL RASLRPRVDE PREARWREQM DALAAASRKT YRAFVERDGF
710 720 730 740 750
VDYFRTATPV DVIERMTLGS RPASRRSMRG VQDLRAIPWV FAWTQCRSIL
760 770 780 790 800
PGWYGLGSAL EQGVQQFGEA ALAEMARDWP FFANLLDDVE MVLAKCDLDI
810 820 830 840 850
AEAFSKLSGA LHEEFFGLIR DEFARTRHWL LRLKGSDALL QGDPRLAASI
860 870 880 890 900
RLRNPYVDPM SLLQVDLLQR WRAGEHTDDA VLQALVACVN GVSQGLQNTG
Length:900
Mass (Da):99,526
Last modified:September 5, 2012 - v1
Checksum:iB301E340C210EE27
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003470 Genomic DNA. Translation: AGG90360.1.
RefSeqiWP_007509388.1. NZ_AJXV01000015.1.
YP_007591595.1. NC_020541.1.

Genome annotation databases

EnsemblBacteriaiAGG90360; AGG90360; R2APBS1_3293.
EIM03558; EIM03558; UUC_05702.
KEGGirhd:R2APBS1_3293.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003470 Genomic DNA. Translation: AGG90360.1.
RefSeqiWP_007509388.1. NZ_AJXV01000015.1.
YP_007591595.1. NC_020541.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGG90360; AGG90360; R2APBS1_3293.
EIM03558; EIM03558; UUC_05702.
KEGGirhd:R2APBS1_3293.

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 2APBS1Imported.

Entry informationi

Entry nameiI4WVR6_9GAMM
AccessioniPrimary (citable) accession number: I4WVR6
Secondary accession number(s): M4NHC5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: June 24, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.