Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Xylose isomerase

Gene

xylA

Organism
Gardnerella vaginalis 0288E
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationNote: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei102UniRule annotation1
Active sitei105UniRule annotation1
Metal bindingi233Magnesium 1UniRule annotation1
Metal bindingi269Magnesium 1UniRule annotation1
Metal bindingi269Magnesium 2UniRule annotation1
Metal bindingi272Magnesium 2UniRule annotation1
Metal bindingi297Magnesium 1UniRule annotation1
Metal bindingi308Magnesium 2UniRule annotation1
Metal bindingi310Magnesium 2UniRule annotation1
Metal bindingi341Magnesium 1UniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotationImported
Biological processCarbohydrate metabolism, Xylose metabolismUniRule annotationSAAS annotation
LigandMagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotationSAAS annotation (EC:5.3.1.5UniRule annotationSAAS annotation)
Gene namesi
Name:xylAUniRule annotation
ORF Names:CGSMWGv0288E_00674Imported
OrganismiGardnerella vaginalis 0288EImported
Taxonomic identifieri698952 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaBifidobacterialesBifidobacteriaceaeGardnerella
Proteomesi
  • UP000003609 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliI4LMI3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotationSAAS annotation

Phylogenomic databases

OrthoDBiPOG091H07LC

Family and domain databases

HAMAPiMF_00455 Xylose_isom_A, 1 hit
InterProiView protein in InterPro
IPR036237 Xyl_isomerase-like_sf
IPR013452 Xylose_isom_bac
IPR001998 Xylose_isomerase
PANTHERiPTHR32176:SF0 PTHR32176:SF0, 1 hit
PRINTSiPR00688 XYLOSISMRASE
SUPFAMiSSF51658 SSF51658, 1 hit
TIGRFAMsiTIGR02630 xylose_isom_A, 1 hit
PROSITEiView protein in PROSITE
PS51415 XYLOSE_ISOMERASE, 1 hit

Sequencei

Sequence statusi: Complete.

I4LMI3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLWNIDKIE YVGRAQGPKE GLAFHYYDAD RVVAGKKMKD WLRFAVAWWH
60 70 80 90 100
TFDQTLVDPF GTGTAHRPYY GKYSDPMDEA LAKVDYAFEL FQKLSVGYFC
110 120 130 140 150
FHDRDIAPEG DTLRETNRNL DRVVDKIEEN MKSTGIKLLW NTSSLFTNPR
160 170 180 190 200
FVSGASTSPF ADIYAYSAGQ LKHSLEIGKR LGAENYVFWG GREGYENLWN
210 220 230 240 250
TQMKREQEHM AKFFHMCHDY AQEIGFDAQF LIEPKAKEPT MHQYDFDAST
260 270 280 290 300
AIAFLRTYDL MDVFKLNLEG NHANLAGHTY QHEIRTAREA GVLGSLDANQ
310 320 330 340 350
GDKLIGWDMD EFPTDLYETS TVMWEVLQEG SIGPHGGLNF DAKPRRTSFD
360 370 380 390 400
AEDLFRSHIA GMDSFAAGLL VAAKMHEDKF IENLQADRYS SYDSGIGLTV
410 420 430 440
ENGTASLSSL EEYALDIPQE KLIAATKSDH LESVKATINN YIIDALREG
Length:449
Mass (Da):50,938
Last modified:September 5, 2012 - v1
Checksum:iDCF303018582F74E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADEN01000002 Genomic DNA Translation: EIK78173.1
RefSeqiWP_004116263.1, NZ_ADEN01000002.1

Genome annotation databases

EnsemblBacteriaiEIK78173; EIK78173; CGSMWGv0288E_00674
PATRICifig|698952.3.peg.129

Similar proteinsi

Entry informationi

Entry nameiI4LMI3_GARVA
AccessioniPrimary (citable) accession number: I4LMI3
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: June 20, 2018
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health