Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

I4F0C0 (I4F0C0_MODMB) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=6.5.1.1 EMBL CCH89083.1
Gene names
Name:lig EMBL CCH89083.1
Ordered Locus Names:MODMU_3673 EMBL CCH89083.1
OrganismModestobacter marinus (strain BC501) [Complete proteome] [HAMAP]
Taxonomic identifier1144889 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeGeodermatophilaceaeModestobacter

Protein attributes

Sequence length357 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CCH89083.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I4F0C0 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 0E827DF102CE75D0

FASTA35739,834
        10         20         30         40         50         60 
MDLPVMPPVK PMLAKPAAAL PTGEGWFYEP KWDGFRCIVF RDGDEVELGS RNERPLTRYF 

        70         80         90        100        110        120 
PDVAEAVKAQ LPERCVVDGE IVVPRGDRLD FESLLQRIHP AASRVTKLAT ETPASFVAFD 

       130        140        150        160        170        180 
LLAIGDESLL ETPYAERQAR LREALAGAKA PVYVSTVTQD AEVGQRWFAE FEGAGLDGVI 

       190        200        210        220        230        240 
AKRGDQVYAP DQRLMTKVKH VRTADCVVAG FRWHKSGPVV GSLLLGLYDD AGSLQHIGVA 

       250        260        270        280        290        300 
ASFPMKRRAE LVDELTPYRA EALDGHPWQD WANAQTDADG EHRMPGATSR WNAGKDLSWV 

       310        320        330        340        350 
PLRPELVVEI RYDQLEGSRL RHTGQFQRWR PDREARSCTY DQLEVPVKYD LAEVLGG 

« Hide

References

[1]"Genome sequence of radiation-resistant Modestobacter marinus strain BC501, a representative Actinobacterium that thrives on calcareous stone surfaces."
Normand P., Gury J., Pujic P., Chouaia B., Crotti E., Brusetti L., Daffonchio D., Vacherie B., Barbe V., Medigue C., Calteau A., Ghodhbane-Gtari F., Essoussi I., Nouioui I., Abbassi-Ghozzi I., Gtari M.
J. Bacteriol. 194:4773-4774(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BC501 EMBL CCH89083.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO203431 Genomic DNA. Translation: CCH89083.1.
RefSeqYP_006367560.1. NC_017955.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCH89083; CCH89083; MODMU_3673.
GeneID13006858.
KEGGmmar:MODMU_3673.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycMMAR477641:GLGK-3657-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI4F0C0_MODMB
AccessionPrimary (citable) accession number: I4F0C0
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: October 16, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)