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I4EYW1

- I4EYW1_MODMB

UniProt

I4EYW1 - I4EYW1_MODMB

Protein

Xylose isomerase

Gene

xylA

Organism
Modestobacter marinus (strain BC501)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei55 – 551UniRule annotation
    Active sitei58 – 581UniRule annotation
    Metal bindingi182 – 1821Magnesium 1UniRule annotation
    Metal bindingi218 – 2181Magnesium 1UniRule annotation
    Metal bindingi218 – 2181Magnesium 2UniRule annotation
    Metal bindingi221 – 2211Magnesium 2UniRule annotation
    Metal bindingi246 – 2461Magnesium 1UniRule annotation
    Metal bindingi256 – 2561Magnesium 2UniRule annotation
    Metal bindingi258 – 2581Magnesium 2UniRule annotation
    Metal bindingi294 – 2941Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciMMAR477641:GLGK-3140-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotationImported
    Ordered Locus Names:MODMU_3150Imported
    OrganismiModestobacter marinus (strain BC501)Imported
    Taxonomic identifieri1144889 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeGeodermatophilaceaeModestobacter
    ProteomesiUP000006461: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliI4EYW1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013453. XylA_actinobac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02631. xylA_Arthro. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I4EYW1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSTLQPTPED KFSFGLWTVG WQARDPFGDA TRPEVDVVES IHKLAEMGAY    50
    GVTFHDDDVI PFGSDTTARD ERIKRFRAAL DETGLVVPMV TTNLFTHPVF 100
    KEGGLTANDR EVRRFAMRKV MRNMDLAAEL GAKTYVLWGG REGAEVDVAK 150
    DLLASLDRYA EAIDTLAQYS EDRGYGLRFA LEPKPNEPRG DIFLPTIGHA 200
    IAFISRLQHK DLVGINPEVG HEQMANLNYT HGIAEAIWLG KLFHIDLNGQ 250
    HGPKFDQDLV FGHGDLLQAF STVDLLENGS LTGGPTYDGP RHFDYKPLRT 300
    EDMDGVWRSA AANMRTYLLL KERAAAFRAD PEVQEALAAA KVPDLRTPTV 350
    GEGGYEELLA DRSALEDFDA ETVAQRGAGV TRIDQLMIEH LLGAR 395
    Length:395
    Mass (Da):43,782
    Last modified:September 5, 2012 - v1
    Checksum:i20151FD7DB025D7A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO203431 Genomic DNA. Translation: CCH88574.1.
    RefSeqiYP_006367057.1. NC_017955.1.

    Genome annotation databases

    EnsemblBacteriaiCCH88574; CCH88574; MODMU_3150.
    GeneIDi13011901.
    KEGGimmar:MODMU_3150.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO203431 Genomic DNA. Translation: CCH88574.1 .
    RefSeqi YP_006367057.1. NC_017955.1.

    3D structure databases

    ProteinModelPortali I4EYW1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCH88574 ; CCH88574 ; MODMU_3150 .
    GeneIDi 13011901.
    KEGGi mmar:MODMU_3150.

    Phylogenomic databases

    KOi K01805.

    Enzyme and pathway databases

    BioCyci MMAR477641:GLGK-3140-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013453. XylA_actinobac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02631. xylA_Arthro. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of radiation-resistant Modestobacter marinus strain BC501, a representative Actinobacterium that thrives on calcareous stone surfaces."
      Normand P., Gury J., Pujic P., Chouaia B., Crotti E., Brusetti L., Daffonchio D., Vacherie B., Barbe V., Medigue C., Calteau A., Ghodhbane-Gtari F., Essoussi I., Nouioui I., Abbassi-Ghozzi I., Gtari M.
      J. Bacteriol. 194:4773-4774(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BC501Imported.

    Entry informationi

    Entry nameiI4EYW1_MODMB
    AccessioniPrimary (citable) accession number: I4EYW1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3