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I4EVU7

- I4EVU7_MODMB

UniProt

I4EVU7 - I4EVU7_MODMB

Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

MODMU_2075

Organism
Modestobacter marinus (strain BC501)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 10 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMMAR477641:GLGK-2073-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, ligase domain proteinImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:MODMU_2075Imported
    OrganismiModestobacter marinus (strain BC501)Imported
    Taxonomic identifieri1144889 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeGeodermatophilaceaeModestobacter
    ProteomesiUP000006461: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I4EVU7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPPDPLATY RAKRDPARTA EPVPAADQPL PVGDDDTFVV QEHHTPRGRT    50
    GQRVHWDLRL ERDGVLKSWA VPKGPPTEPG VNRLAVPTED HPLEYASFAG 100
    TITAGEYGGG QVSIWDAGRY ATEKWADDHV TVSFDGRRLS GRYVVFRLPD 150
    GTWNVRKLDA DPVVDAPVAA GVPEDLTPML AAIGELPRAD DPRWGYEFKW 200
    DGVRALAHVR GGRVRLRARS GNDVTATYPE LHRLPEVLSG HDAVVDGEVV 250
    ALDGRGRPDF GLLQGRMHRT GPEVARMAAA APVTYLVFDL LALDGENLLG 300
    LPYTERRERL DALGLASDRW VTTPWFRGNG EQVQAASLEN GLEGVVAKRL 350
    DSVYRPGGRG PDWRKVKNLR TQSVVVGGWR PGEGRRAGGI GSLLVGVHDD 400
    TGRLVFAGHV GTGFTARALA DLAPLLTPRA TPPFADALPR EVTRDARWVE 450
    PLLVGEVRYG EWTREGRLRH PAWRGLRDDV AAADVVVEP 489
    Length:489
    Mass (Da):53,431
    Last modified:September 5, 2012 - v1
    Checksum:i94DF9B804D3AF243
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO203431 Genomic DNA. Translation: CCH87510.1.
    RefSeqiYP_006365997.1. NC_017955.1.

    Genome annotation databases

    EnsemblBacteriaiCCH87510; CCH87510; MODMU_2075.
    GeneIDi13010723.
    KEGGimmar:MODMU_2075.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO203431 Genomic DNA. Translation: CCH87510.1 .
    RefSeqi YP_006365997.1. NC_017955.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCH87510 ; CCH87510 ; MODMU_2075 .
    GeneIDi 13010723.
    KEGGi mmar:MODMU_2075.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci MMAR477641:GLGK-2073-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of radiation-resistant Modestobacter marinus strain BC501, a representative Actinobacterium that thrives on calcareous stone surfaces."
      Normand P., Gury J., Pujic P., Chouaia B., Crotti E., Brusetti L., Daffonchio D., Vacherie B., Barbe V., Medigue C., Calteau A., Ghodhbane-Gtari F., Essoussi I., Nouioui I., Abbassi-Ghozzi I., Gtari M.
      J. Bacteriol. 194:4773-4774(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BC501Imported.

    Entry informationi

    Entry nameiI4EVU7_MODMB
    AccessioniPrimary (citable) accession number: I4EVU7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 10 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3