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I4EVU7 (I4EVU7_MODMB) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL CCH87510.1
Gene names
Ordered Locus Names:MODMU_2075 EMBL CCH87510.1
OrganismModestobacter marinus (strain BC501) [Complete proteome] [HAMAP]
Taxonomic identifier1144889 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeGeodermatophilaceaeModestobacter

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CCH87510.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I4EVU7 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 94DF9B804D3AF243

FASTA48953,431
        10         20         30         40         50         60 
MAPPDPLATY RAKRDPARTA EPVPAADQPL PVGDDDTFVV QEHHTPRGRT GQRVHWDLRL 

        70         80         90        100        110        120 
ERDGVLKSWA VPKGPPTEPG VNRLAVPTED HPLEYASFAG TITAGEYGGG QVSIWDAGRY 

       130        140        150        160        170        180 
ATEKWADDHV TVSFDGRRLS GRYVVFRLPD GTWNVRKLDA DPVVDAPVAA GVPEDLTPML 

       190        200        210        220        230        240 
AAIGELPRAD DPRWGYEFKW DGVRALAHVR GGRVRLRARS GNDVTATYPE LHRLPEVLSG 

       250        260        270        280        290        300 
HDAVVDGEVV ALDGRGRPDF GLLQGRMHRT GPEVARMAAA APVTYLVFDL LALDGENLLG 

       310        320        330        340        350        360 
LPYTERRERL DALGLASDRW VTTPWFRGNG EQVQAASLEN GLEGVVAKRL DSVYRPGGRG 

       370        380        390        400        410        420 
PDWRKVKNLR TQSVVVGGWR PGEGRRAGGI GSLLVGVHDD TGRLVFAGHV GTGFTARALA 

       430        440        450        460        470        480 
DLAPLLTPRA TPPFADALPR EVTRDARWVE PLLVGEVRYG EWTREGRLRH PAWRGLRDDV 


AAADVVVEP 

« Hide

References

[1]"Genome sequence of radiation-resistant Modestobacter marinus strain BC501, a representative Actinobacterium that thrives on calcareous stone surfaces."
Normand P., Gury J., Pujic P., Chouaia B., Crotti E., Brusetti L., Daffonchio D., Vacherie B., Barbe V., Medigue C., Calteau A., Ghodhbane-Gtari F., Essoussi I., Nouioui I., Abbassi-Ghozzi I., Gtari M.
J. Bacteriol. 194:4773-4774(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BC501 EMBL CCH87510.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO203431 Genomic DNA. Translation: CCH87510.1.
RefSeqYP_006365997.1. NC_017955.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCH87510; CCH87510; MODMU_2075.
GeneID13010723.
KEGGmmar:MODMU_2075.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycMMAR477641:GLGK-2073-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI4EVU7_MODMB
AccessionPrimary (citable) accession number: I4EVU7
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: October 16, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)