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Protein

Non-structural protein NS-S

Gene

N

Organism
Puumala virus (strain Sotkamo/V-2969/81)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein NS-S
Short name:
NSs
Gene namesi
Name:N
OrganismiPuumala virus (strain Sotkamo/V-2969/81)
Taxonomic identifieri39002 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeHantavirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Myodes glareolus (Bank vole) (Clethrionomys glareolus) [TaxID: 447135]
ProteomesiUP000008482: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9090Non-structural protein NS-SPRO_0000423150Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the hantavirus NS-S protein family.Curated

Sequencei

Sequence statusi: Complete.

I4EPA3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNSNLLLPDK NLRMQREQWK WTQMTLIKTH CKPGNKQCQH WRTNSQTTRE
60 70 80 90
GWQMLCPGKK WILNLLTRLG LNLMTTSRRD QALGMEMSLM
Length:90
Mass (Da):10,731
Last modified:September 5, 2012 - v1
Checksum:iE0E369115B177312
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X61035 Genomic RNA. No translation available.
HE801633 Genomic RNA. Translation: CCH22847.1.
RefSeqiYP_004928150.1. NC_005224.1.

Genome annotation databases

GeneIDi11293625.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X61035 Genomic RNA. No translation available.
HE801633 Genomic RNA. Translation: CCH22847.1.
RefSeqiYP_004928150.1. NC_005224.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi11293625.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Cloning and sequencing of Puumala virus Sotkamo strain S and M RNA segments: evidence for strain variation in hantaviruses and expression of the nucleocapsid protein."
    Vapalahti O.P., Kallio-Kokko H., Salonen E.M., Brummer-Korvenkontio M., Vaheri A.
    J. Gen. Virol. 73:829-838(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  2. "Resequencing of the Puumala virus strain Sotkamo from the WHO Arbovirus collection."
    Kurolt I.C., Paessler S., Markotic A.
    Virus Genes 45:389-392(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
    Strain: Isolate Sotkamo 2009/WHO Arbovirus collection.

Entry informationi

Entry nameiNSS_PUUMS
AccessioniPrimary (citable) accession number: I4EPA3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 24, 2013
Last sequence update: September 5, 2012
Last modified: January 7, 2015
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.