I4E1A6 (I4E1A6_STRIJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:	alr EMBL BAM23946.1
Ordered Locus Names:	SCIM_1292 EMBL BAM23946.1

Organism

Streptococcus intermedius (strain JTH08) [Complete proteome] [HAMAP] EMBL BAM23946.1

Taxonomic identifier

591365 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus › Streptococcus anginosus group › Streptococcus intermedius

Protein attributes

Sequence length	368 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I4E1A6 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: EE810F97C47D724B	FASTA	368	40,166
	10 20 30 40 50 60 MKTSNHRPTK AIVDLAAIHF NIKQIAAHIP GDVEKWAVVK ADAYGHGAVA VTQSIEPIVD 70 80 90 100 110 120 GFCVSNIDEA LELREAGISK KILVLGVSTI QSVPLAMKYK ITYTVASLEW IDLLLQSNID 130 140 150 160 170 180 VTGLVVHIKI DSGMGRIGFR NSQDAQEAIH RLKKVGAQVE GIFTHFATAD EADTQKFAAQ 190 200 210 220 230 240 LARFKEILER LDIVPPIVHA SNSATTLWHA DTVMKAVRLG DIIYGLNPSG RTLELPYEMK 250 260 270 280 290 300 PALSLISELV HVKQLEAGAD IGYGATYTSD SPQFIGTIPL GYADGWTRDM QGFNVLIDGK 310 320 330 340 350 360 ACPVVGRVSM DQITVRLPRF YPIGTSVVFI GKSGEEVISA TDVAEKRGTI NYEVVCLLSD RVPRIYKK

References

[1]

"Complete genome sequencing of Streptococcus intermedius, a pathogen of human purulent infections." Kikuchi K., Baba T., Sasaki T., Kishii K., Takeuchi F., Watanabe S., Sekine M., Matsuo M., Cui L., Ito T., Hiramatsu K. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JTH08 EMBL BAM23946.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP010969 Genomic DNA. Translation: BAM23946.1.
RefSeq	YP_006470194.1. NC_018073.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAM23946; BAM23946; SCIM_1292.
GeneID	13155743.
KEGG	sie:SCIM_1292.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I4E1A6_STRIJ

Accession

Primary (citable) accession number: I4E1A6

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)