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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

amy

Organism
Streptococcus intermedius (strain JTH08)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei234 – 2341NucleophileUniRule annotation
Active sitei264 – 2641Proton donorUniRule annotation

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSINT591365:GLL4-819-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported
Gene namesi
Name:amyImported
Ordered Locus Names:SCIM_0786Imported
OrganismiStreptococcus intermedius (strain JTH08)Imported
Taxonomic identifieri591365 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcusStreptococcus anginosus group
ProteomesiUP000002897: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiFFHWYYP.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

I4DZV0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENQTLMQYF EWYLPNDGQH WNRLAKEAPH LASKGIRKVW MPPAFKATSS
60 70 80 90 100
NDVGYGIYDL FDLGEFNQKG TVRTKYGLKE EYLKAIKSLK ENGIEPIADV
110 120 130 140 150
VLNHKAAADY KERFTVIEVD PNDRTVALSE PFEIKGWTKF TFPGRHKKYN
160 170 180 190 200
NFEWHWYHFT GTDYDAQRNK SGIYLIQGDN KGWADDDLVD NENGNFDYLM
210 220 230 240 250
YADLDFKHPE VIQNLYDWAD WFIKTTGIHG FRLDAIKHID SFFMGNFIRD
260 270 280 290 300
ISAKYGDDFY VFGEFWNSDE TANNDYLGSI DYRFDLVDVK LHHNLFDASC
310 320 330 340 350
AGSGYDLRNI FEQTLVKNHP ESAVTFVDNH DTQRGQALES TIEEWFKPAA
360 370 380 390 400
YALILLREAG LPCVFYGDYY GVNGEFAQDS FQTVLDKLLD IRLNLAYGEQ
410 420 430 440 450
KDYFDDEHCI AWTRSGKDNG QPIAVILTND QANSKRMYVG ENWAGKEFKD
460 470 480
YLGNNPSTVI IKEDGWANFP VVEKSVSVWS AK
Length:482
Mass (Da):55,695
Last modified:September 5, 2012 - v1
Checksum:iDF1ABE137FDD0B07
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010969 Genomic DNA. Translation: BAM23440.1.
RefSeqiYP_006469688.1. NC_018073.1.

Genome annotation databases

EnsemblBacteriaiBAM23440; BAM23440; SCIM_0786.
GeneIDi13155404.
KEGGisie:SCIM_0786.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010969 Genomic DNA. Translation: BAM23440.1.
RefSeqiYP_006469688.1. NC_018073.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAM23440; BAM23440; SCIM_0786.
GeneIDi13155404.
KEGGisie:SCIM_0786.

Phylogenomic databases

KOiK01176.
OMAiFFHWYYP.

Enzyme and pathway databases

BioCyciSINT591365:GLL4-819-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequencing of Streptococcus intermedius, a pathogen of human purulent infections."
    Kikuchi K., Baba T., Sasaki T., Kishii K., Takeuchi F., Watanabe S., Sekine M., Matsuo M., Cui L., Ito T., Hiramatsu K.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JTH08Imported.

Entry informationi

Entry nameiI4DZV0_STRIJ
AccessioniPrimary (citable) accession number: I4DZV0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: February 4, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.