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I4DXM6 (I4DXM6_STRIJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:nanA EMBL BAM22666.1
Ordered Locus Names:SCIM_0012 EMBL BAM22666.1
OrganismStreptococcus intermedius (strain JTH08) [Complete proteome] [HAMAP] EMBL BAM22666.1
Taxonomic identifier591365 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcusStreptococcus anginosus group

Protein attributes

Sequence length920 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I4DXM6 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: D0D1827F7C1D13C6

FASTA920103,023
        10         20         30         40         50         60 
MNWSFFDWKK QDKIRKLVVG ATFIVIGIAI FLALSGLKQV NTVLANTKKV ESGINNSIAD 

        70         80         90        100        110        120 
LLKETNVIPR DYYARQLENV QTIFEKENVV TNDSNNQRID LSGELDKLKQ LQTATIHIEF 

       130        140        150        160        170        180 
KADANAPRFY NLFSVSSDKV KNEYFTMAVY NNTAIVEGRD KDGKQFYNSY NDAPLKIKSG 

       190        200        210        220        230        240 
QWNSVTFTVD GPNSDHPNGQ VRLYVNGVLS RTSKLSGRFI KDMPDVNHVQ IGKTNRAGSM 

       250        260        270        280        290        300 
MWGSNLHVRN LTVYNRALTS EEVQKRSQLF KRSDLEKRLP EGALLTEKTD VFKSGYNNQP 

       310        320        330        340        350        360 
NSEGINSYRI PALLRTDKGT LIAGADQRRL HHADYGDIGM VVRRSEDNGK TWGDKKVLSN 

       370        380        390        400        410        420 
LRDNPDAKDP VAPSPLNIDM TLVQDPTTKR IFAIYDMFPE GKGIFGMPKI NEKAYEQVGD 

       430        440        450        460        470        480 
KTYQILYKQG EFGHYTIREN GEVYDANNQK TDYRVVVNPT KADYRDKGDI YKGQELVGNI 

       490        500        510        520        530        540 
YFAQSKKNPF RIAYTSYLWM SYSDDDGKTW SAPRDITSGV RKDWMKFLGT GPGTGIVLRT 

       550        560        570        580        590        600 
GKHKGRILIP VYTTNNVSHL NGSQSSRLIY SDDHGETWHA GEAINDNRQV GGQKIHSSTM 

       610        620        630        640        650        660 
NNRNAQNTES TVVQLNNGDI KLFMRGLMGD LQVATSKDGG ATWEKEIKRY PQVKDVYVQM 

       670        680        690        700        710        720 
SAIHTMHDGI EYVVLSNAGG PERTNGLVHL ARVEKNGELT WLKHNLIQKG EFAYNSLQDL 

       730        740        750        760        770        780 
GNGEYGLFYE HRENGQNPYT LSYKKFNWDF LSKDLISPKE VKVKKAVDRG KGVVGLEFDS 

       790        800        810        820        830        840 
EVLVNQAPTL KLTNGKIATF ITQYDSKTLL FKVDKGAIGQ KITGLASGSI ESIHNLPVNL 

       850        860        870        880        890        900 
TGASIPGGVN GGKGTVNEVP EYKEKKSTKK PATEKKQANK VLTNHHNLPS TGSTTNVSIL 

       910        920 
FLGIATIILG LLTMINKRKQ 

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References

[1]"Complete genome sequencing of Streptococcus intermedius, a pathogen of human purulent infections."
Kikuchi K., Baba T., Sasaki T., Kishii K., Takeuchi F., Watanabe S., Sekine M., Matsuo M., Cui L., Ito T., Hiramatsu K.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JTH08 EMBL BAM22666.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010969 Genomic DNA. Translation: BAM22666.1.
RefSeqYP_006468914.1. NC_018073.1.

3D structure databases

ProteinModelPortalI4DXM6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAM22666; BAM22666; SCIM_0012.
GeneID13155177.
KEGGsie:SCIM_0012.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.
OMAGGPKREN.

Enzyme and pathway databases

BioCycSINT591365:GLL4-12-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR004124. Glyco_hydro_33_N.
IPR001791. Laminin_G.
IPR019931. LPXTG_anchor.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF02973. Sialidase. 1 hit.
[Graphical view]
SMARTSM00282. LamG. 1 hit.
[Graphical view]
SUPFAMSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
TIGRFAMsTIGR01167. LPXTG_anchor. 1 hit.
PROSITEPS50847. GRAM_POS_ANCHORING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI4DXM6_STRIJ
AccessionPrimary (citable) accession number: I4DXM6
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: May 14, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)