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I4DCQ9 (I4DCQ9_DESAJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Desaci_4757 EMBL AFM43583.1
Encoded onPlasmid pDESACI.01 EMBL AFM43583.1
OrganismDesulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) [Complete proteome] [HAMAP] EMBL AFM43583.1
Taxonomic identifier646529 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfosporosinus

Protein attributes

Sequence length289 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFM43583.1
   Technical termComplete proteome
Plasmid EMBL AFM43583.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I4DCQ9 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: B6001F826D8405F2

FASTA28933,106
        10         20         30         40         50         60 
MYVAPMLLNP IEEIPEYNGL SIVELKYDGF RTILSDMDDG IKLFTRHQTN ITDIFPELRN 

        70         80         90        100        110        120 
PKLPSGIVLD GETIQADPEG RPIFEDVMSR FHMRNASKIK HLAISNPVTF CVFDILYYRG 

       130        140        150        160        170        180 
KSVMSLPLLQ RKTILDEVLP SNEKSVIKVQ YMEGSKAVAL FKACKERDLE GIVIKQNKPY 

       190        200        210        220        230        240 
VPGRRPKGYW DKLICYTETK VNIIGIRKGK FGWLVEYPDG RFAGVIELAV PLAAKQILLD 

       250        260        270        280 
FARKYGRNTD KNMYLPEGIP CKVRYRSLTK NGLLRLAEFQ EFVNPRQIA 

« Hide

References

[1]"Complete Genome Sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T."
Pester M., Brambilla E., Alazard D., Rattei T., Weinmaier T., Han J., Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C.S., Tapia R., Land M.L. expand/collapse author list , Hauser L., Kyrpides N.C., Ivanova N.N., Pagani I., Huntmann M., Wei C.L., Davenport K.W., Daligault H., Chain P.S., Chen A., Mavromatis K., Markowitz V., Szeto E., Mikhailova N., Pati A., Wagner M., Woyke T., Ollivier B., Klenk H.P., Spring S., Loy A.
J. Bacteriol. 194:6300-6301(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 22704 / JCM 16185 / SJ4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003640 Genomic DNA. Translation: AFM43583.1.
RefSeqYP_006464410.1. NC_018066.1.

3D structure databases

ProteinModelPortalI4DCQ9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFM43583; AFM43583; Desaci_4757.
GeneID13149315.
KEGGdai:Desaci_4757.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMALYTRHNN.

Enzyme and pathway databases

BioCycDACI646529:GLCJ-4742-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI4DCQ9_DESAJ
AccessionPrimary (citable) accession number: I4DCQ9
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: May 14, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)