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Protein
Submitted name:

ATP dependent DNA ligase-like protein

Gene

Desaci_4757

Organism
Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciDACI646529:GLCJ-4742-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligase-like proteinImported
Gene namesi
Ordered Locus Names:Desaci_4757Imported
Encoded oniPlasmid pDESACI.01Imported
OrganismiDesulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4)Imported
Taxonomic identifieri646529 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfosporosinus
ProteomesiUP000002892: Plasmid pDESACI.01

Structurei

3D structure databases

ProteinModelPortaliI4DCQ9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiLYTRHNN.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I4DCQ9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYVAPMLLNP IEEIPEYNGL SIVELKYDGF RTILSDMDDG IKLFTRHQTN
60 70 80 90 100
ITDIFPELRN PKLPSGIVLD GETIQADPEG RPIFEDVMSR FHMRNASKIK
110 120 130 140 150
HLAISNPVTF CVFDILYYRG KSVMSLPLLQ RKTILDEVLP SNEKSVIKVQ
160 170 180 190 200
YMEGSKAVAL FKACKERDLE GIVIKQNKPY VPGRRPKGYW DKLICYTETK
210 220 230 240 250
VNIIGIRKGK FGWLVEYPDG RFAGVIELAV PLAAKQILLD FARKYGRNTD
260 270 280
KNMYLPEGIP CKVRYRSLTK NGLLRLAEFQ EFVNPRQIA
Length:289
Mass (Da):33,106
Last modified:September 5, 2012 - v1
Checksum:iB6001F826D8405F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003640 Genomic DNA. Translation: AFM43583.1.
RefSeqiYP_006464410.1. NC_018066.1.

Genome annotation databases

EnsemblBacteriaiAFM43583; AFM43583; Desaci_4757.
GeneIDi13149315.
KEGGidai:Desaci_4757.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003640 Genomic DNA. Translation: AFM43583.1.
RefSeqiYP_006464410.1. NC_018066.1.

3D structure databases

ProteinModelPortaliI4DCQ9.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFM43583; AFM43583; Desaci_4757.
GeneIDi13149315.
KEGGidai:Desaci_4757.

Phylogenomic databases

KOiK01971.
OMAiLYTRHNN.

Enzyme and pathway databases

BioCyciDACI646529:GLCJ-4742-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 22704 / JCM 16185 / SJ4Imported.

Entry informationi

Entry nameiI4DCQ9_DESAJ
AccessioniPrimary (citable) accession number: I4DCQ9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: January 7, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.