I4DCQ9 (I4DCQ9_DESAJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase-like protein EMBL AFM43583.1

Gene names

ORF Names:

Desaci_4757 EMBL AFM43583.1

Encoded on

Plasmid pDESACI.01 EMBL AFM43583.1

Organism

Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) [Complete proteome] [HAMAP] EMBL AFM43583.1

Taxonomic identifier

646529 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfosporosinus › Desulfosporosinus acidiphilus

Protein attributes

Sequence length	289 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AFM43583.1
Technical term	Complete proteome Plasmid EMBL AFM43583.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I4DCQ9 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: B6001F826D8405F2	FASTA	289	33,106
	10 20 30 40 50 60 MYVAPMLLNP IEEIPEYNGL SIVELKYDGF RTILSDMDDG IKLFTRHQTN ITDIFPELRN 70 80 90 100 110 120 PKLPSGIVLD GETIQADPEG RPIFEDVMSR FHMRNASKIK HLAISNPVTF CVFDILYYRG 130 140 150 160 170 180 KSVMSLPLLQ RKTILDEVLP SNEKSVIKVQ YMEGSKAVAL FKACKERDLE GIVIKQNKPY 190 200 210 220 230 240 VPGRRPKGYW DKLICYTETK VNIIGIRKGK FGWLVEYPDG RFAGVIELAV PLAAKQILLD 250 260 270 280 FARKYGRNTD KNMYLPEGIP CKVRYRSLTK NGLLRLAEFQ EFVNPRQIA

References

[1]

"Complete genome sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T." Pester M., Brambilla E., Alazard D., Rattei T., Weinmaier T., Han J., Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C.S., Tapia R., Land M.L. , Hauser L., Kyrpides N.C., Ivanova N.N., Pagani I., Huntmann M., Wei C.L., Davenport K.W., Daligault H., Chain P.S., Chen A., Mavromatis K., Markowitz V., Szeto E., Mikhailova N., Pati A., Wagner M., Woyke T., Ollivier B., Klenk H.P., Spring S., Loy A. J. Bacteriol. 194:6300-6301(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 22704 / JCM 16185 / SJ4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003640 Genomic DNA. Translation: AFM43583.1.
RefSeq	YP_006464410.1. NC_018066.1.
3D structure databases
ProteinModelPortal	I4DCQ9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFM43583; AFM43583; Desaci_4757.
GeneID	13149315.
KEGG	dai:Desaci_4757.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I4DCQ9_DESAJ

Accession

Primary (citable) accession number: I4DCQ9

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	May 1, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)