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I4CXQ0 (I4CXQ0_PSEST) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
ORF Names:A458_18100 EMBL AFM34845.1, A458_18160 EMBL AFM34857.1
OrganismPseudomonas stutzeri CCUG 29243 EMBL AFM34857.1
Taxonomic identifier1196835 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas ›

Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
I4CXQ0 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: E15AF9C848E78BCE

FASTA39743,536
        10         20         30         40         50         60 
MAKEKFERNK PHVNVGTIGH VDHGKTTLTA ALTRVCSEVF GSARVDFDKI DSAPEEKARG 

        70         80         90        100        110        120 
ITINTAHVEY DSNVRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLSRQVGVPY IVVFLNKADM VDDAELLELV EMEVRDLLST YDFPGDDTPI IIGSALMALN 

       190        200        210        220        230        240 
GEDDNELGTT AVKKLVETLD TYIPEPVRAI DKPFLMPIED VFSISGRGTV VTGRVERGIV 

       250        260        270        280        290        300 
KVQEEIEIVG LRDTTKTTCT GVEMFRKLLD EGRAGENCGV LLRGTKRDDV ERGQVLAKPG 

       310        320        330        340        350        360 
TIKPHTKFEA EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGSCELPEG VEMVMPGDNV 

       370        380        390 
KMVVTLIKPI AMEDGLRFAI REGGRTVGAG VVAKIVE

« Hide

References

[1]"Complete Genome Sequence of the Naphthalene-Degrading Bacterium Pseudomonas stutzeri AN10 (CCUG 29243)."
Brunet-Galmes I., Busquets A., Pena A., Gomila M., Nogales B., Garcia-Valdes E., Lalucat J., Bennasar A., Bosch R.
J. Bacteriol. 194:6642-6643(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CCUG 29243 EMBL AFM34857.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003677 Genomic DNA. Translation: AFM34845.1.
CP003677 Genomic DNA. Translation: AFM34857.1.
RefSeqYP_006459268.1. NC_018028.1.
YP_006459280.1. NC_018028.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFM34845; AFM34845; A458_18100.
AFM34857; AFM34857; A458_18160.
GeneID13146183.
13146191.
KEGGpsc:A458_18100.
psc:A458_18160.

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycPSTU1196835:GLIX-3639-MONOMER.
PSTU1196835:GLIX-3652-MONOMER.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI4CXQ0_PSEST
AccessionPrimary (citable) accession number: I4CXQ0
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: May 29, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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