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I4CT52 (I4CT52_PSEST) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length854 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I4CT52 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 955E0EF9430866FF

FASTA85494,282
        10         20         30         40         50         60 
MALDEYQRMR DFAATPEPSG KARGRSRKVQ SLQYCIQKHD ATRLHYDFRL ELDGTLKSWA 

        70         80         90        100        110        120 
IPKGPSLDPS VRRLAVHVED HPLEYATFEG SIPAGHYGAG DVIVWDRGVW IPQGDPQEGY 

       130        140        150        160        170        180 
RKGKLKFSLE GEKLAGSWNL VRTHMAGKKE QWFLIKSHDE AAREEGEYDV VTAEPNSVLS 

       190        200        210        220        230        240 
DRTLVPRKRG AAKARVAEAP AKPVKAPARK RASRKKSDAV KLEGAVPAKL PETFKPQLAT 

       250        260        270        280        290        300 
LVDAVPSGDW RYEIKFDGYR MLARIDAGKV ALFTRNGHDW TAKMPQQAAA LAGLGLESGW 

       310        320        330        340        350        360 
LDGEVVVPNE EGAPDFQALQ NAFEAGRSGS ILYYLFDVPY LNGMDLRDVP LEQRRAALRE 

       370        380        390        400        410        420 
VLEGSDSELL RFSDDFTEQP DSILESACQM KLEGLIGKRA GSSYTSRRSS SWVKIKCSNR 

       430        440        450        460        470        480 
QEFIIVGYTE PKGTRTGFGA LLLGLHDDSG KLLYAGKVGT GFNQATLKSL HKQLKKLEAD 

       490        500        510        520        530        540 
KSPLAKAAPA ADVRGAQWLK PELMCEAAYA EMTRQGVVRH SVFHGLRSDK PADAITRERA 

       550        560        570        580        590        600 
KPASRSSKAE QRQTDPIGSG RIKISSPERI IDPSSGITKI EVARFYAQIA PWALPQLRAR 

       610        620        630        640        650        660 
PLALVRAPEG ITGELFFQKH ADKLAIPHIT QLDPALDPKH GALLVIDSAE ALVGAAQMGT 

       670        680        690        700        710        720 
IELHCWNAVA PELEHPDRFV LDLDPDPALP WKSMLEATQL TQTLLDEIGL TSFLKTSGGK 

       730        740        750        760        770        780 
GIHIVVPLDP VHGWSEVKAF SQAIAKYLAK LLPSHFSAVS GPKNRVGRIF IDYLRNSRGA 

       790        800        810        820        830        840 
STVAPYSVRA REGLPVSVPI HREELADLKG ANLWTVRNLL ERLQELGDDD PWADMTRVRQ 

       850 
TITAQMRERL AMPA 

« Hide

References

[1]"Complete Genome Sequence of the Naphthalene-Degrading Bacterium Pseudomonas stutzeri AN10 (CCUG 29243)."
Brunet-Galmes I., Busquets A., Pena A., Gomila M., Nogales B., Garcia-Valdes E., Lalucat J., Bennasar A., Bosch R.
J. Bacteriol. 194:6642-6643(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CCUG 29243 EMBL AFM33259.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003677 Genomic DNA. Translation: AFM33259.1.
RefSeqYP_006457682.1. NC_018028.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFM33259; AFM33259; A458_10100.
GeneID13148287.
KEGGpsc:A458_10100.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPSTU1196835:GLIX-2023-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI4CT52_PSEST
AccessionPrimary (citable) accession number: I4CT52
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)