Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alpha-amylase family protein

Gene

A458_09985

Organism
Pseudomonas stutzeri CCUG 29243
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciPSTU1196835:GLIX-2000-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase family proteinImported
Gene namesi
ORF Names:A458_09985Imported
OrganismiPseudomonas stutzeri CCUG 29243Imported
Taxonomic identifieri1196835 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000006063 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

I4CT29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKPRKPAAF IKDPLWYKDA VVYQVHLKSF YDSNNDGVGD FPGLIEKLDY
60 70 80 90 100
IADLGVNTIW LLPFYPSPRR DDGYDIADYR GVHPEYGSMA DARRFIAEAH
110 120 130 140 150
KRGLRVITEL VINHTSDQHP WFQRARKAKK GSAARDFYVW SDTDKKYDGT
160 170 180 190 200
RIIFLDTEKS NWTWDPVAKQ YFWHRFYSHQ PDLNFDNPQV MKAVLAVMRY
210 220 230 240 250
WLDMGIDGLR LDAIPYLVER DGTNNENLPE THAVLKAIRA EIDANYPDRM
260 270 280 290 300
LLAEANQWPE DTQLYFGGED GGPGDECHMA FHFPLMPRMY MAIAQEDRFP
310 320 330 340 350
ITDILRQTPD IPENCQWAIF LRNHDELTLE MVTDKERDYL WNYYASDKRA
360 370 380 390 400
RINLGIRRRL APLLERDRRR IELLNSLLLS MPGTPVIYYG DEIGMGDNIF
410 420 430 440 450
LGDRDGVRTP MQWSVDRNGG FSRADPPNLV LPPVMDPLYG YYTINVEAQQ
460 470 480 490 500
RDPHSLLNWT RRMLTIRKQF KAFGRGTLKM LAPSNRRILA YMREFTGANG
510 520 530 540 550
ETEIIFCVAN VSRSAQAAEL EMSQYAGMVP VEMVGGSAFP PIGQLPYLLT
560 570 580 590 600
LPHYGFYWFQ LALTNQMPSW HQEPVDTMPD FQTLVLKRLD TLTAANRRIL
610 620 630 640 650
ETEALPAYLP KRRWFAAKDV AIESVRISYC VPFGDPNRPV LLSELCVESA
660 670 680 690 700
GRSDLYQLPL GFLAETEFEV ALPQQLALAR VRRGPQVGLM TDAFALEQFS
710 720 730 740 750
AAVIQGLRDE LVLPCNDGEI RFVPMPQLAD LQLPAHPEVR FISAEQSNSS
760 770 780 790 800
AIIDNKVMIK LLRRVAPGVH PELEMGGFLT ERGFAHISGM LGQVSRINKQ
810 820 830 840 850
GEPVALMVIQ HFLDSQGDAW VWTLNNLDRA VRDEIAGGVS MHENQFSALD
860 870 880 890 900
ELQAFNRLLG QRLGEMHMAL ATQTEDPAFA YESTSTADTK QWEQSVSAQL
910 920 930 940 950
EQALQRLEEH RSSFDRKEAT ALGQLLARRD KLLEQVQRLA ARTVGGVRTR
960 970 980 990 1000
VHGDLHLGQV LVVQGDAYFI DFEGEPARSL DERRAKHSPF KDVSGLLRSF
1010 1020 1030 1040 1050
EYAAAMTIRG AQISDSTPEA DQARQRIAAS YQSSAQAAFF EAYREATAEL
1060 1070 1080 1090 1100
PHDWRDADGA NAALLLFSLE KCAYEIVYEA ENRPTWLPVP LQGLLALAQQ

LFDGGSND
Length:1,108
Mass (Da):125,797
Last modified:September 5, 2012 - v1
Checksum:i3750787160FAAE50
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003677 Genomic DNA. Translation: AFM33236.1.
RefSeqiWP_014820198.1. NC_018028.1.
YP_006457659.1. NC_018028.1.

Genome annotation databases

EnsemblBacteriaiAFM33236; AFM33236; A458_09985.
GeneIDi23691942.
KEGGipsc:A458_09985.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003677 Genomic DNA. Translation: AFM33236.1.
RefSeqiWP_014820198.1. NC_018028.1.
YP_006457659.1. NC_018028.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFM33236; AFM33236; A458_09985.
GeneIDi23691942.
KEGGipsc:A458_09985.

Phylogenomic databases

KOiK05343.

Enzyme and pathway databases

BioCyciPSTU1196835:GLIX-2000-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Naphthalene-Degrading Bacterium Pseudomonas stutzeri AN10 (CCUG 29243)."
    Brunet-Galmes I., Busquets A., Pena A., Gomila M., Nogales B., Garcia-Valdes E., Lalucat J., Bennasar A., Bosch R.
    J. Bacteriol. 194:6642-6643(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCUG 29243Imported.

Entry informationi

Entry nameiI4CT29_PSEST
AccessioniPrimary (citable) accession number: I4CT29
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: April 29, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.